Pre_GI: BLASTP Hits

Some Help

Query: NC_008463:4133700:4146826 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 4146826, End: 4147941, Length: 1116

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013592:1602242:1601127160112716022451119Dickeya dadantii Ech586, complete genomeefflux transporter, RND family, MFP subunit6e-110397
NC_014500:842493:8455558455558466701116Dickeya dadantii 3937 chromosome, complete genomeRND efflux membrane fusion protein2e-107389
NC_003295:3421520:3467878346787834689931116Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSPORT LIPOPROTEIN6e-107387
NC_014311:1635408:1635408163540816365231116Ralstonia solanacearum PSI07 chromosome, complete genomemultidrug efflux protein7e-106384
NC_010512:110932:1367801367801379041125Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceefflux transporter, RND family, MFP subunit7e-106384
NC_014306:2442471:2466756246675624678621107Erwinia billingiae Eb661, complete genomeHlyD-family secretion protein7e-98357
NC_013421:1696746:1696746169674616978551110Pectobacterium wasabiae WPP163, complete genomeefflux transporter, RND family, MFP subunit4e-97355
NC_014258:127500:1480171480171491261110Pantoea vagans C9-1 plasmid pPag3, complete sequenceputative RND superfamily transporter membrane- fusion protein3e-95348
NC_009659:1129066:1150710115071011518131104Janthinobacterium sp. Marseille chromosome, complete genomecomponent of multidrug efflux system6e-60231
NC_010172:4185904:4217707421770742187921086Methylobacterium extorquens PA1, complete genomeefflux transporter, RND family, MFP subunit4e-58225
NC_012988:4633930:4664094466409446651461053Methylobacterium extorquens DM4, complete genomemultidrug efflux system protein2e-57223
NC_012796:3374911:3374911337491133760411131Desulfovibrio magneticus RS-1, complete genomeputative efflux system protein4e-34145
NC_011992:1179084:1179084117908411803371254Acidovorax ebreus TPSY, complete genomeefflux transporter, RND family, MFP subunit1e-33144
NC_008782:1277117:1277117127711712782741158Acidovorax sp. JS42, complete genomeefflux transporter, RND family, MFP subunit8e-32138
NC_015554:3964000:3972604397260439736501047Alteromonas sp. SN2 chromosome, complete genomeRND family efflux transporter MFP subunit4e-31135
NC_015563:4583906:4603129460312946043791251Delftia sp. Cs1-4 chromosome, complete genomeRND family efflux transporter MFP subunit1e-30134
NC_017506:1100679:1147643114764311487611119Marinobacter adhaerens HP15 chromosome, complete genomeRND family efflux transporter MFP subunit2e-29130
NC_012791:2622923:2643093264309326442861194Variovorax paradoxus S110 chromosome 1, complete genomeefflux transporter, RND family, MFP subunit2e-28127
NC_010524:2761394:2780010278001027811911182Leptothrix cholodnii SP-6, complete genomeefflux transporter, RND family, MFP subunit1e-28127
NC_009720:900884:9229089229089240321125Xanthobacter autotrophicus Py2, complete genomeRND family efflux transporter MFP subunit2e-26120
NC_019907:1454554:1455621145562114567331113Liberibacter crescens BT-1 chromosome, complete genomeCo/Zn/Cd efflux system membrane fusion protein3e-21102
NC_020211:996497:1017106101710610182271122Serratia marcescens WW4, complete genomeRND family efflux transporter MFP subunit5e-2099
NC_016818:1795576:1838982183898218400461065Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRND family efflux transporter, MFP subunit1e-1997.8
NC_009485:1487485:1510442151044215115181077Bradyrhizobium sp. BTAi1 chromosome, complete genomeRND family mulitdrug efflux protein2e-1894
NC_019907:1454554:1454554145455414556031050Liberibacter crescens BT-1 chromosome, complete genomeRND efflux membrane fusion protein3e-1789.7
NC_016818:1795576:1840047184004718411381092Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRND family efflux transporter, MFP subunit6e-1789
NC_009485:1487485:1509330150933015104451116Bradyrhizobium sp. BTAi1 chromosome, complete genomeRND family mulitdrug efflux protein1e-1687.4
NC_007645:5724000:5727223572722357283051083Hahella chejuensis KCTC 2396, complete genomeMembrane-fusion protein1e-1480.9
NC_008740:443274:489846489846490487642Marinobacter aquaeolei VT8, complete genomesecretion protein HlyD3e-1376.3
NC_008260:2961291:2979343297934329804161074Alcanivorax borkumensis SK2, complete genomeMultidrug transporter mdtA1e-1274.3
NC_015061:3840463:3909527390952739106121086Rahnella sp. Y9602 chromosome, complete genomeefflux transporter, RND family, MFP subunit2e-1067
NC_013722:1816561:1845389184538918465071119Xanthomonas albilineans, complete genomeprobable membrane fusion protein7e-1065.1
NC_003228:3669151:3679463367946336805241062Bacteroides fragilis NCTC 9343, complete genomeputative conserved lipoprotein9e-0961.6
NC_016776:3714642:3724954372495437260151062Bacteroides fragilis 638R, complete genomeputative conserved lipoprotein9e-0961.6
NC_014541:2978500:2995068299506829961741107Ferrimonas balearica DSM 9799 chromosome, complete genomeefflux transporter, RND family, MFP subunit9e-0961.6
NC_013209:1406793:1415877141587714169711095Acetobacter pasteurianus IFO 3283-01, complete genomemultidrug resistance transporter HlyD/EmrA/FusE8e-0961.6
NC_017100:1407804:1416888141688814179821095Acetobacter pasteurianus IFO 3283-03, complete genomemultidrug resistance transporter HlyD/EmrA/FusE8e-0961.6
NC_017108:1406787:1415871141587114169651095Acetobacter pasteurianus IFO 3283-12, complete genomemultidrug resistance transporter HlyD/EmrA/FusE8e-0961.6
NC_017111:1406787:1415871141587114169651095Acetobacter pasteurianus IFO 3283-32, complete genomemultidrug resistance transporter HlyD/EmrA/FusE8e-0961.6
NC_017121:1406787:1415871141587114169651095Acetobacter pasteurianus IFO 3283-07, complete genomemultidrug resistance transporter HlyD/EmrA/FusE8e-0961.6
NC_017125:1407804:1416888141688814179821095Acetobacter pasteurianus IFO 3283-22, complete genomemultidrug resistance transporter HlyD/EmrA/FusE8e-0961.6
NC_017146:1407804:1416888141688814179821095Acetobacter pasteurianus IFO 3283-26, complete genomemultidrug resistance transporter HlyD/EmrA/FusE8e-0961.6
NC_017150:1406793:1415877141587714169711095Acetobacter pasteurianus IFO 3283-01-42C, complete genomemultidrug resistance transporter HlyD/EmrA/FusE8e-0961.6
NC_006347:3760447:3770766377076637718181053Bacteroides fragilis YCH46, complete genomeputative multidrug resistance protein8e-0961.6
NC_014365:2004332:2013503201350320146541152Desulfarculus baarsii DSM 2075 chromosome, complete genomeefflux transporter, RND family, MFP subunit9e-0755.1