Pre_GI: BLASTP Hits

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Query: NC_008278:6885254:6922622 Frankia alni ACN14a, complete genome

Start: 6922622, End: 6923185, Length: 564

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017186:3947874:396178839617883962360573Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator4e-30130
NC_014318:3947845:396175939617593962331573Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator4e-30130
NC_014666:3311893:331668033166803317264585Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR9e-24109
NC_008596:3404832:343369134336913434278588Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, putative7e-1580.1
NC_007974:934000:935555935555936148594Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, TetR family5e-1270.5
NC_014829:405104:417243417243417824582Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional regulator, TetR family7e-1167
NC_008392:666000:669413669413670042630Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, TetR family4e-0961.2
NC_014814:2588628:264271626427162643297582Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, TetR family1e-0859.7
NC_015957:7348269:737280273728027373383582Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR6e-0753.9
NC_009480:1261961:127705712770571277671615Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative transcriptional regulator, TetR family4e-0651.2