Pre_GI: BLASTP Hits

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Query: NC_008278:6854759:6862282 Frankia alni ACN14a, complete genome

Start: 6862282, End: 6863511, Length: 1230

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007777:4954306:4959583495958349607941212Frankia sp. CcI3, complete genometranscriptional regulator, XRE family1e-113410
NC_009921:1813500:1832504183250418337151212Frankia sp. EAN1pec, complete genometranscriptional regulator, XRE family1e-107390
NC_014666:300571:3146723146723159311260Frankia sp. EuI1c chromosome, complete genomehelix-turn-helix domain protein3e-25116
NC_006361:1665378:1705599170559917067741176Nocardia farcinica IFM 10152, complete genomeputative DNA-binding protein2e-24114
NC_014165:3559305:3568184356818435694041221Thermobispora bispora DSM 43833 chromosome, complete genomeXRE family transcriptional regulator4e-22106
NC_014318:9604367:9616187961618796174011215Amycolatopsis mediterranei U32 chromosome, complete genomeXRE family transcriptional regulator2e-1894
NC_017186:9604427:9616247961624796174611215Amycolatopsis mediterranei S699 chromosome, complete genomeXRE family transcriptional regulator2e-1894
NC_013131:9903320:9922317992231799235491233Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, XRE family9e-1581.6
NC_013093:1213908:1225890122589012271011212Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, XRE family2e-1273.9
NC_017093:1411532:1412458141245814136841227Actinoplanes missouriensis 431, complete genomeputative transcriptional regulator3e-1273.2
NC_015953:3227000:3239336323933632405561221Streptomyces sp. SirexAA-E chromosome, complete genomeXRE family transcriptional regulator2e-1170.9
NC_016111:2402891:2408521240852124098251305Streptomyces cattleya NRRL 8057, complete genomeHelix-turn-helix protein1e-0965.1
NC_007333:3244572:3257242325724232584471206Thermobifida fusca YX, complete genomehelix-turn-helix motif2e-0963.9
NC_013929:5431954:5434505543450554358031299Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein5e-0962.8
NC_013510:2432879:2440113244011324411651053Thermomonospora curvata DSM 43183, complete genomehypothetical protein2e-0757.4
NC_009953:2808288:2821875282187528234491575Salinispora arenicola CNS-205 chromosome, complete genomeXRE family transcriptional regulator2e-0757.4
NC_017186:6539181:6550920655092065521551236Amycolatopsis mediterranei S699 chromosome, complete genomeXRE family transcriptional regulator3e-0756.6
NC_014318:6539137:6550876655087665521111236Amycolatopsis mediterranei U32 chromosome, complete genomeXRE family transcriptional regulator3e-0756.6
NC_018750:6588206:6608500660850066098131314Streptomyces venezuelae ATCC 10712, complete genomeputative transcriptional regulator7e-0755.5
NC_013510:4960500:4969443496944349706451203Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family2e-0653.9