Pre_GI: BLASTP Hits

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Query: NC_008278:613329:622408 Frankia alni ACN14a, complete genome

Start: 622408, End: 623847, Length: 1440

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008278:1876435:1880790188079018822741485Frankia alni ACN14a, complete genomePutative WD-40 repeat protein7e-37155
NC_009921:3666898:366935536693553670095741Frankia sp. EAN1pec, complete genome3e-35150
NC_008278:1876435:1883668188366818852301563Frankia alni ACN14a, complete genomehypothetical protein2e-34147
NC_014666:7838500:7857542785754278591251584Frankia sp. EuI1c chromosome, complete genomeWD40 repeat, subgroup6e-34145
NC_009921:6421387:6433394643339464345511158Frankia sp. EAN1pec, complete genomeTIR protein4e-26119
NC_009921:4035225:4071324407132440738762553Frankia sp. EAN1pec, complete genomeTetratricopeptide TPR_2 repeat protein3e-25116
NC_007777:1018824:1018824101882410216282805Frankia sp. CcI3, complete genomeputative ATP/GTP binding protein5e-22106
NC_008278:514600:5337995337995363272529Frankia alni ACN14a, complete genomeputative ATP/GTP binding protein1e-21105
NC_014666:1844882:1847658184765818492531596Frankia sp. EuI1c chromosome, complete genomeWD40 repeat, subgroup2e-21104
NC_009921:8215996:8252167825216782533841218Frankia sp. EAN1pec, complete genomehypothetical protein4e-1996.3
NC_008278:874015:8761188761188777791662Frankia alni ACN14a, complete genomehypothetical protein; putative TIR (Toll/Interleukin receptor) and RNA binding domains3e-1893.6
NC_009921:3255833:3255833325583332599004068Frankia sp. EAN1pec, complete genomeWD-40 repeat protein7e-1892.4
NC_014666:1601972:161569416156941616164471Frankia sp. EuI1c chromosome, complete genome4e-1583.2
NC_011894:6220791:623066262306626231375714Methylobacterium nodulans ORS 2060, complete genomeTIR protein8e-1582
NC_014666:2589227:2590547259054725924751929Frankia sp. EuI1c chromosome, complete genomeWD-40 repeat-containing protein9e-1375.5
NC_013757:1438812:1458928145892814615072580Geodermatophilus obscurus DSM 43160, complete genomeputative ATP/GTP binding protein8e-1168.9
NC_008278:3601959:3614846361484636180523207Frankia alni ACN14a, complete genomehypothetical protein; putative P-loop containing nucleotide triphosphate hydrolases and TIR domains2e-1067.4
NC_013757:1212308:1230217123021712331952979Geodermatophilus obscurus DSM 43160, complete genomeputative ATP/GTP binding protein1e-0965.1