Pre_GI: BLASTP Hits

Some Help

Query: NC_008278:5855401:5887289 Frankia alni ACN14a, complete genome

Start: 5887289, End: 5887882, Length: 594

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014666:1805806:1827973182797318308462874Frankia sp. EuI1c chromosome, complete genomesigma-70 region 2 domain protein3e-1478.2
NC_018524:2246225:224728922472892247852564Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family protein8e-1477
NC_017955:3731480:376471937647193765261543Modestobacter marinus, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-1065.9
NC_015953:2349503:235809623580962358641546Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-1065.5
NC_013929:7278414:728319972831997283825627Streptomyces scabiei 87.22 chromosome, complete genomesigma factor3e-0755.1
NC_016582:8711199:872658987265898727149561Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative sigma factor2e-0652.4
NC_008711:1224164:1231912123191212335581647Arthrobacter aurescens TC1, complete genomeputative RNA polymerase sigma (70) factor9e-0650.1