Pre_GI: BLASTP Hits

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Query: NC_008269:1067082:1073800 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Start: 1073800, End: 1074579, Length: 780

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008740:1414926:142406314240631424830768Marinobacter aquaeolei VT8, complete genomeTIR protein7e-67253
NC_008705:1557711:160893816089381609789852Mycobacterium sp. KMS, complete genomeTIR protein4e-64244
NC_008146:1577604:160328116032811604132852Mycobacterium sp. MCS, complete genomeToll-Interleukin receptor4e-64244
NC_008253:1938975:195597819559781956841864Escherichia coli 536, complete genomehypothetical protein3e-33142
NC_004431:2185750:220276322027632203686924Escherichia coli CFT073, complete genomehypothetical protein3e-33142
NC_011205:2180598:219228921922892193170882Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853TIR protein2e-33142
NC_011274:2044000:205649520564952057376882Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-33142
NC_011294:2053991:206527220652722066153882Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-33142
NC_016831:947281:977164977164978045882Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-33142
NC_015857:265721:279340279340280002663Brucella pinnipedialis B2/94 chromosome chromosome 1, completehypothetical protein2e-32139
NC_016795:9384:140051400514667663Brucella abortus A13334 chromosome 1, complete sequencehypothetical protein2e-32139
NC_009505:264963:278417278417279244828Brucella ovis ATCC 25840 chromosome I, complete sequencehypothetical protein2e-32139
NC_010742:264433:277977277977278804828Brucella abortus S19 chromosome 1, complete sequencehypothetical protein2e-32139
NC_006932:266000:279593279593280345753Brucella abortus biovar 1 str. 9-941 chromosome I, completehypothetical protein2e-32139
NC_007618:262415:275959275959276711753Brucella melitensis biovar Abortus 2308 chromosome I, completehypothetical protein2e-32139
NC_017244:264921:278343278343279005663Brucella melitensis M28 chromosome chromosome 1, complete sequencehypothetical protein4e-32138
NC_017246:264917:278338278338279000663Brucella melitensis M5-90 chromosome chromosome I, completehypothetical protein4e-32138
NC_012441:264795:278349278349279176828Brucella melitensis ATCC 23457 chromosome I, complete sequencehypothetical protein3e-32138
NC_003317:1719546:172407717240771724829753Brucella melitensis 16M chromosome I, complete sequencehypothetical protein3e-32138
NC_010169:261473:275030275030275857828Brucella suis ATCC 23445 chromosome I, complete sequenceTIR1e-31137
NC_008686:95326:105698105698106597900Paracoccus denitrificans PD1222 chromosome 1, complete sequenceTIR protein1e-29129
NC_010175:3287500:3290905329090532926411737Chloroflexus aurantiacus J-10-fl, complete genomeTIR protein2e-24112
NC_012032:3281869:3285922328592232876581737Chloroflexus sp. Y-400-fl, complete genomeTIR protein2e-24112
NC_017955:3731480:385094838509483851739792Modestobacter marinus, complete genomehypothetical protein5e-1788.2
NC_015508:296856:308690308690309379690Agrobacterium sp. H13-3 chromosome linear, complete sequencehypothetical protein5e-1684.7
NC_010465:3431500:343325034332503433945696Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein2e-1582.8
NC_007494:621673:635584635584635979396Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencehypothetical protein6e-1477.8
NC_013158:768000:784289784289785086798Halorhabdus utahensis DSM 12940, complete genomeTIR protein4e-1375.5
NC_017955:1667500:167758316775831678083501Modestobacter marinus, complete genomehypothetical protein2e-1272.8
NC_010338:4108280:4124317412431741254411125Caulobacter sp. K31, complete genomeTIR protein4e-1168.6
NC_015216:1102837:111373211137321114694963Methanobacterium sp. AL-21 chromosome, complete genomeTiR protein4e-0858.5
NC_009663:2184594:2201553220155322038712319Sulfurovum sp. NBC37-1, complete genomehypothetical protein5e-0858.2
NC_017248:264847:278786278786279388603Brucella melitensis NI chromosome chromosome I, complete sequencehypothetical protein6e-0754.7
NC_002939:2844240:2857020285702028583301311Geobacter sulfurreducens PCA, complete genomehypothetical protein8e-0754.3