Pre_GI: BLASTP Hits

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Query: NC_008268:7485710:7487216 Rhodococcus sp. RHA1, complete genome

Start: 7487216, End: 7487596, Length: 381

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015957:5182460:519985851998585200697840Streptomyces violaceusniger Tu 4113 chromosome, complete genomeIstB domain-containing protein ATP-binding protein4e-29126
NC_015635:3542125:355765435576543558427774Microlunatus phosphovorus NM-1, complete genometransposition helper protein3e-26117
NC_008699:590000:615676615676616455780Nocardioides sp. JS614, complete genomeIstB domain protein ATP-binding protein1e-24111
NC_008699:2916752:292960929296092930388780Nocardioides sp. JS614, complete genomeIstB domain protein ATP-binding protein1e-24111
NC_012803:1302261:131668913166891317474786Micrococcus luteus NCTC 2665, complete genomeDNA replication protein1e-22105
NC_012490:2660089:266072126607212661512792Rhodococcus erythropolis PR4, complete genometransposition helper protein2e-22103
NC_012490:43000:444824448245273792Rhodococcus erythropolis PR4, complete genometransposition helper protein2e-22103
NC_016943:1037000:104211810421181042939822Blastococcus saxobsidens DD2, complete genomeputative transposase helper protein2e-21101
NC_013131:4525075:454220345422034543033831Catenulispora acidiphila DSM 44928, complete genomeIstB domain protein ATP-binding protein5e-2199.8
NC_015312:6398931:640064364006436401434792Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeIstB domain-containing protein ATP-binding protein6e-2095.9
NC_013441:2842134:285391828539182854706789Gordonia bronchialis DSM 43247, complete genomeIstB domain protein ATP-binding protein5e-1683.2
NC_015312:2278566:229867122986712299450780Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeIstB domain-containing protein ATP-binding protein2e-1477.4
NC_015312:1265797:132486413248641325643780Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeIstB domain-containing protein ATP-binding protein2e-1477.4
NC_015312:3675148:370395537039553704734780Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeIstB domain-containing protein ATP-binding protein2e-1477.4
NC_013235:1325975:134064113406411341069429Nakamurella multipartita DSM 44233, complete genomehypothetical protein3e-1270.5
NC_009338:3029507:303896630389663039685720Mycobacterium gilvum PYR-GCK chromosome, complete genomeIstB ATP binding domain-containing protein1e-1065.5
NC_008595:2687245:272735527273552728149795Mycobacterium avium 104, complete genomehelper protein1e-0961.6
NC_008595:2687245:271321727132172714011795Mycobacterium avium 104, complete genomehelper protein1e-0961.6
NC_008595:2546696:256243025624302563224795Mycobacterium avium 104, complete genomehelper protein1e-0961.6