Pre_GI: BLASTP Hits

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Query: NC_008268:7485710:7485710 Rhodococcus sp. RHA1, complete genome

Start: 7485710, End: 7486240, Length: 531

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012490:43000:4527345273468141542Rhodococcus erythropolis PR4, complete genometransposase5e-35147
NC_012490:2660089:2661512266151226630531542Rhodococcus erythropolis PR4, complete genometransposase5e-35147
NC_015312:6398931:6401431640143164030771647Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeIntegrase catalytic region2e-34145
NC_013131:4525075:453806545380654538523459Catenulispora acidiphila DSM 44928, complete genomeintegrase catalytic subunit5e-32136
NC_015957:5182460:5198218519821851997831566Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase catalytic subunit2e-31134
NC_015635:3542125:3558424355842435599531530Microlunatus phosphovorus NM-1, complete genometransposase7e-30129
NC_008699:590000:6141266141266156791554Nocardioides sp. JS614, complete genomeIntegrase, catalytic region7e-26116
NC_008699:2916752:2928059292805929296121554Nocardioides sp. JS614, complete genomeIntegrase, catalytic region7e-26116
NC_016943:1037000:1042936104293610445071572Blastococcus saxobsidens DD2, complete genomeintegrase, catalytic region1e-25115
NC_012803:1302261:1315226131522613166921467Micrococcus luteus NCTC 2665, complete genometransposase2e-25114
NC_008595:2687245:2711640271164027132201581Mycobacterium avium 104, complete genometransposase1e-1066.2
NC_008595:2546696:2560853256085325624331581Mycobacterium avium 104, complete genometransposase1e-1066.2
NC_008595:2687245:2725778272577827273581581Mycobacterium avium 104, complete genometransposase1e-1066.2
NC_009338:3029507:3041211304121130427041494Mycobacterium gilvum PYR-GCK chromosome, complete genomeintegrase catalytic subunit9e-0856.6
NC_015312:1265797:1323329132332913248671539Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeIntegrase catalytic region6e-0650.4
NC_015312:2278566:2299447229944723009851539Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeIntegrase catalytic region6e-0650.4