Pre_GI: BLASTP Hits

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Query: NC_008268:7180663:7218209 Rhodococcus sp. RHA1, complete genome

Start: 7218209, End: 7218538, Length: 330

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:9450747:945034694503469450756411Streptomyces scabiei 87.22 chromosome, complete genomeMerR family transcriptional regulator5e-2096.3
NC_015312:3675148:369202136920213692356336Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein4e-1993.2
NC_015312:3675148:372806637280663728449384Pseudonocardia dioxanivorans CB1190 chromosome, complete genomehypothetical protein1e-1685.5
NC_008278:2813362:284587028458702846193324Frankia alni ACN14a, complete genomehypothetical protein3e-1684
NC_013131:7401253:741954274195427419910369Catenulispora acidiphila DSM 44928, complete genomehypothetical protein4e-1476.6
NC_010814:155834:173587173587173889303Geobacter lovleyi SZ, complete genomehypothetical protein4e-0650.1