Pre_GI: BLASTP Hits

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Query: NC_008268:3335035:3342028 Rhodococcus sp. RHA1, complete genome

Start: 3342028, End: 3343584, Length: 1557

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014814:4235477:4284797428479742864251629Mycobacterium sp. Spyr1 chromosome, complete genometransposase, IS4 family1e-169596
NC_008726:494769:5003895003895020261638Mycobacterium vanbaalenii PYR-1, complete genometransposase, IS4 family protein2e-168592
NC_008726:610000:6209206209206225571638Mycobacterium vanbaalenii PYR-1, complete genometransposase, IS4 family protein2e-168592
NC_008726:610000:6158426158426174791638Mycobacterium vanbaalenii PYR-1, complete genometransposase, IS4 family protein2e-168592
NC_016943:4194002:4226715422671542283761662Blastococcus saxobsidens DD2, complete genometransposase3e-167588
NC_017904:2379387:2422660242266024243121653Mycobacterium sp. MOTT36Y chromosome, complete genometransposase IS4 family protein9e-160563
NC_016906:1458158:1468204146820414697031500Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative transposase1e-88327
NC_016906:408720:4250144250144265131500Gordonia polyisoprenivorans VH2 chromosome, complete genometransposase-like protein1e-88327
NC_009921:3098271:3127470312747031290381569Frankia sp. EAN1pec, complete genometransposase IS4 family protein3e-87323
NC_015635:2001539:2013569201356920145941026Microlunatus phosphovorus NM-1, complete genomeputative transposase6e-87322
NC_014814:4235477:4252167425216742536781512Mycobacterium sp. Spyr1 chromosome, complete genometransposase8e-86318
NC_013441:1221472:1239676123967612411901515Gordonia bronchialis DSM 43247, complete genometransposase IS4 family protein1e-85317
NC_017904:2379387:2415872241587224173411470Mycobacterium sp. MOTT36Y chromosome, complete genometransposase4e-83309
NC_014814:4235477:4280460428046042818811422Mycobacterium sp. Spyr1 chromosome, complete genometransposase1e-81304
NC_015576:3009335:3017021301702130185321512Mycobacterium sp. JDM601 chromosome, complete genomeputative transposase6e-80298
NC_014814:2588628:2608393260839326098501458Mycobacterium sp. Spyr1 chromosome, complete genometransposase1e-79297
NC_015859:1099919:1118519111851911198891371Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element5e-78292
NC_008596:1933836:1940497194049719419631467Mycobacterium smegmatis str. MC2 155, complete genomeIS1549, transposase4e-77289
NC_008596:2873675:2885869288586928873351467Mycobacterium smegmatis str. MC2 155, complete genomeIS1549, transposase4e-77289
NC_015859:2726414:2732067273206727333711305Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element5e-61235
NC_010831:40000:4633046330478561527Chlorobium phaeobacteroides BS1, complete genometransposase IS4 family protein4e-60232
NC_014151:3611956:364970636497063650323618Cellulomonas flavigena DSM 20109 chromosome, complete genome5e-58225
NC_008596:2873675:2887291288729128885051215Mycobacterium smegmatis str. MC2 155, complete genome2e-53211
NC_015914:4046000:4061405406140540629251521Cyclobacterium marinum DSM 745 chromosome, complete genometransposase IS4 family protein3e-49196
NC_015160:797780:8013808013808029361557Odoribacter splanchnicus DSM 20712 chromosome, complete genometransposase IS4 family protein3e-47189
NC_015160:4285542:4302522430252243040841563Odoribacter splanchnicus DSM 20712 chromosome, complete genometransposase IS4 family protein9e-46185
NC_015160:3729628:3741977374197737435571581Odoribacter splanchnicus DSM 20712 chromosome, complete genometransposase IS4 family protein2e-45183
NC_008596:2873675:288484028848402885700861Mycobacterium smegmatis str. MC2 155, complete genome1e-41171
NC_015635:2001539:201305220130522013621570Microlunatus phosphovorus NM-1, complete genomeputative transposase1e-32141
NC_009633:3933941:3936631393663139385051875Alkaliphilus metalliredigens QYMF chromosome, complete genometransposase, IS4 family protein2e-31137
NC_009633:3055413:3072534307253430744081875Alkaliphilus metalliredigens QYMF chromosome, complete genometransposase, IS4 family protein2e-31137
NC_015949:1719575:1738853173885317405141662Caldicellulosiruptor lactoaceticus 6A chromosome, complete genometransposase IS4 family protein6e-27122
NC_014721:729942:7447467447467464071662Caldicellulosiruptor kristjanssonii 177R1B chromosome, completetransposase is4 family protein6e-27122
NC_018867:361423:3753763753763771451770Dehalobacter sp. CF chromosome, complete genomeTransposase8e-26118
NC_018867:10238:1353713537153061770Dehalobacter sp. CF chromosome, complete genomeTransposase8e-26118
NC_018866:154252:1697421697421715111770Dehalobacter sp. DCA chromosome, complete genomehypothetical protein8e-26118
NC_015737:1337605:1357039135703913587931755Clostridium sp. SY8519, complete genomehypothetical protein3e-25117
NC_016786:2017267:203820020382002038742543Corynebacterium diphtheriae HC01 chromosome, complete genomehypothetical protein1e-24115
NC_011830:259121:2620742620742638641791Desulfitobacterium hafniense DCB-2, complete genometransposase IS4 family protein1e-24114
NC_007907:5185510:5202180520218052035261347Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-24114
NC_015436:270820:2737852737852755901806Spirochaeta coccoides DSM 17374 chromosome, complete genometransposase IS4 family protein2e-24114
NC_015573:2463123:2466467246646724681311665Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometransposase IS4 family protein2e-24114
NC_007907:808893:8243658243658259631599Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-24114
NC_014212:3206860:3222567322256732241831617Meiothermus silvanus DSM 9946 chromosome, complete genometransposase IS4 family protein7e-24112
NC_015573:2040500:2046303204630320479671665Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometransposase IS4 family protein1e-23111
NC_009454:136468:1407301407301423731644Pelotomaculum thermopropionicum SI, complete genometransposase4e-23110
NC_007332:642000:6454096454096470671659Mycoplasma hyopneumoniae 7448, complete genomeISMHp1 transposase6e-23109
NC_014831:2258398:2278896227889622805121617Thermaerobacter marianensis DSM 12885 chromosome, complete genometransposase IS4 family protein9e-23108
NC_014153:1663597:1670435167043516721321698Thiomonas intermedia K12 chromosome, complete genometransposase IS4 family protein2e-22107
NC_007907:3722500:3725999372599937275791581Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-22106
NC_007295:618830:6223356223356239931659Mycoplasma hyopneumoniae J, complete genomeputative ISMHp1 transposase4e-22106
NC_015573:3167207:3173254317325431749061653Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometransposase IS4 family protein9e-22105
NC_015573:1729057:1729954172995417316061653Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometransposase IS4 family protein9e-22105
NC_015573:2900906:2912220291222029138721653Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometransposase IS4 family protein9e-22105
NC_007295:533223:5350325350325366901659Mycoplasma hyopneumoniae J, complete genomeputative transposase2e-21104
NC_015573:1729057:1729057172905717323683312Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome2e-21104
NC_015573:1045877:1065571106557110672231653Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometransposase IS4 family protein4e-21103
NC_015519:924000:9403149403149420231710Tepidanaerobacter sp. Re1 chromosome, complete genomehypothetical protein3e-21103
NC_015573:2900906:2911926291192629148832958Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome2e-21103
NC_014721:11437:2502125021280032983Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete5e-21102
NC_014814:3892000:389428238942823894655374Mycobacterium sp. Spyr1 chromosome, complete genome3e-20100
NC_011830:4722607:4728571472857147301511581Desulfitobacterium hafniense DCB-2, complete genometransposase IS1634 family protein4e-20100
NC_021184:3259908:3271710327171032734791770Desulfotomaculum gibsoniae DSM 7213, complete genometransposase1e-1998.6
NC_009921:3098271:313378631337863134613828Frankia sp. EAN1pec, complete genomehypothetical protein2e-1997.4
NC_018870:757416:8094238094238111351713Thermacetogenium phaeum DSM 12270 chromosome, complete genomeIS4-like transposase4e-1996.7
NC_008576:2458573:2469339246933924708681530Magnetococcus sp. MC-1, complete genometransposase, IS4 family protein1e-1895.1
NC_014219:3188128:3208594320859432099671374Bacillus selenitireducens MLS10 chromosome, complete genometransposase IS4 family protein2e-1894.4
NC_008576:3331825:3334282333428233359731692Magnetococcus sp. MC-1, complete genometransposase, IS4 family protein4e-1893.2
NC_009467:117812:1359291359291375751647Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequencetransposase, IS4 family protein8e-1892
NC_015672:399522:4131834131834150181836Flexistipes sinusarabici DSM 4947 chromosome, complete genometransposase IS4 family protein5e-1789.7
NC_017167:407352:4143324143324159541623Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1transposase, IS4 family protein6e-1789.4
NC_009429:622359:6472776472776489231647Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein8e-1789
NC_008340:1303607:1319824131982413215121689Alkalilimnicola ehrlichei MLHE-1, complete genometransposase, IS4 family protein1e-1688.6
NC_008340:420126:4337044337044353921689Alkalilimnicola ehrlichei MLHE-1, complete genometransposase, IS4 family protein4e-1686.3
NC_019897:3251639:3259261325926132609011641Thermobacillus composti KWC4 chromosome, complete genometransposase6e-1685.9
NC_015942:2293455:2305202230520223069051704Acidithiobacillus ferrivorans SS3 chromosome, complete genometransposase IS4 family protein9e-1685.5
NC_016077:1876119:1886473188647318882031731Acidaminococcus intestini RyC-MR95 chromosome, complete genometransposase1e-1585.1
NC_008789:835909:8706428706428723301689Halorhodospira halophila SL1, complete genometransposase, IS4 family protein2e-1584.7
NC_011662:386162:3928623928623945621701Thauera sp. MZ1T, complete genometransposase IS4 family protein2e-1584.3
NC_017167:1648913:1757008175700817586841677Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1transposase IS4 family protein4e-1583.2
NC_010424:697187:7562587562587579941737Candidatus Desulforudis audaxviator MP104C, complete genometransposase2e-1480.9
NC_008554:4586543:4588074458807445897741701Syntrophobacter fumaroxidans MPOB, complete genometransposase, IS4 family protein3e-1480.5
NC_018870:115982:1312761312761329761701Thermacetogenium phaeum DSM 12270 chromosome, complete genomeIS4-like transposase4e-1480.1
NC_014831:2258398:2276829227682922778901062Thermaerobacter marianensis DSM 12885 chromosome, complete genome4e-1479.7
NC_014206:345499:3781943781943798611668Geobacillus sp. C56-T3 chromosome, complete genometransposase IS4 family protein3e-1377
NC_011060:2099255:2118667211866721203131647Pelodictyon phaeoclathratiforme BU-1, complete genometransposase IS4 family protein4e-1376.6
NC_013411:334549:3540593540593556811623Geobacillus sp. Y412MC61, complete genometransposase IS4 family protein4e-1376.6
NC_006510:3133965:3137605313760531392271623Geobacillus kaustophilus HTA426, complete genometransposase4e-1376.6
NC_014206:2516000:2533526253352625351481623Geobacillus sp. C56-T3 chromosome, complete genometransposase IS4 family protein4e-1376.6
NC_020210:661236:6723536723536740201668Geobacillus sp. GHH01, complete genometransposase6e-1376.3
NC_013411:1587689:1588906158890615905731668Geobacillus sp. Y412MC61, complete genometransposase IS4 family protein1e-1275.5
NC_014915:727631:7288487288487305151668Geobacillus sp. Y412MC52 chromosome, complete genometransposase IS4 family protein1e-1275.5
NC_007907:3230513:324385932438593244809951Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1275.5
NC_014206:1467000:1489166148916614908331668Geobacillus sp. C56-T3 chromosome, complete genometransposase IS4 family protein9e-1375.5
NC_009328:2161116:2203659220365922052811623Geobacillus thermodenitrificans NG80-2 chromosome, complete genometransposase8e-1375.5
NC_006510:887545:9101759101759118421668Geobacillus kaustophilus HTA426, complete genometransposase1e-1275.1
NC_018870:115982:1440591440591452311173Thermacetogenium phaeum DSM 12270 chromosome, complete genomeIS4-like transposase2e-1274.3
NC_015186:1504275:1505589150558915073221734Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element3e-1273.6
NC_015186:2197236:2250299225029922520321734Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element3e-1273.6
NC_015186:1126830:1135415113541511371481734Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element4e-1273.2
NC_004829:346929:3731023731023741481047Mycoplasma gallisepticum R, complete genomepredicted transposase6e-1272.8
NC_006510:310212:3268413268413282291389Geobacillus kaustophilus HTA426, complete genometransposase6e-1272.8
NC_014916:22644:2264422644243111668Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequencetransposase IS4 family protein1e-1172
NC_013412:33834:7271727190311761Geobacillus sp. Y412MC61 plasmid pGYMC6101, complete sequencetransposase IS4 family protein1e-1171.6
NC_015160:3729628:374362137436213744028408Odoribacter splanchnicus DSM 20712 chromosome, complete genome8e-1168.9
NC_014098:3030274:3037398303739830391881791Bacillus tusciae DSM 2912 chromosome, complete genometransposase IS4 family protein8e-1065.9
NC_013205:1275012:1292545129254512943351791Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transposase IS4 family protein1e-0965.1
NC_015388:719669:7290917290917305031413Desulfobacca acetoxidans DSM 11109 chromosome, complete genometransposase, IS4 family protein5e-0963.2
NC_006824:109735:1274141274141291141701Azoarcus sp. EbN1 plasmid 2, complete sequencetransposase9e-0962.4
NC_006513:1547092:1549177154917715508771701Azoarcus sp. EbN1, complete genometransposase9e-0962.4
NC_006824:109735:1230971230971247971701Azoarcus sp. EbN1 plasmid 2, complete sequencetransposase8e-0962.4
NC_008576:2458573:2458573245857324604711899Magnetococcus sp. MC-1, complete genometransposase, IS4 family protein1e-0861.6
NC_007907:3230513:324482632448263245458633Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-0859.3
NC_007677:771168:8223648223648240051642Salinibacter ruber DSM 13855, complete genome3e-0757.4
NC_011830:4722607:4751524475152447526101087Desulfitobacterium hafniense DCB-2, complete genome5e-0756.6