Pre_GI: BLASTP Hits

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Query: NC_008260:2442000:2454826 Alcanivorax borkumensis SK2, complete genome

Start: 2454826, End: 2455449, Length: 624

Host Lineage: Alcanivorax borkumensis; Alcanivorax; Alcanivoracaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: This bacterium was isolated from a seawater sediment sample in the North Sea. The species is able to use Mihagol-S (C14,15-n-alkanes) as a principal carbon source. Using n-alkanes as a sole carbon source causes the strains to produce extracellular and membrane-bound surface-active glucose lipids. Phenotypic analysis showed a restricted nutritional profile, high halotolerance, the absence of fermentative metabolism, and a low G+C content. This, in combination with a 16S phylogenetic study, allowed the placing of this organism into a new genus.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014166:1179335:118889211888921189479588Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeTripartite ATP-independent periplasmic transporter subunit DctQ2e-26119
NC_016629:3789554:382948938294893829995507Desulfovibrio africanus str. Walvis Bay chromosome, completetripartite AtP-independent periplasmic transporter subunit DctQ2e-0858.9
NC_007503:1111457:116032211603221160825504Carboxydothermus hydrogenoformans Z-2901, complete genomeTRAP dicarboxylate transporter, DctQ subunit7e-0857
NC_017187:325229:341260341260341805546Arcobacter butzleri ED-1, complete genomeC4-dicarboxylate transport system transport protein small subunit9e-0753.5
NC_009439:4404942:442649044264904426966477Pseudomonas mendocina ymp, complete genometripartite ATP-independent periplasmic transporter DctQ1e-0653.5
NC_015684:3157941:317751531775153178108594Oligotropha carboxidovorans OM5 chromosome, complete genomeTRAP transport system, small permease4e-0651.2
NC_009654:304000:318425318425318946522Marinomonas sp. MWYL1, complete genometripartite ATP-independent periplasmic transporter DctQ5e-0651.2