Pre_GI: BLASTP Hits

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Query: NC_008253:3161311:3206875 Escherichia coli 536, complete genome

Start: 3206875, End: 3207834, Length: 960

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011751:3530954:356188035618803562839960Escherichia coli UMN026 chromosome, complete genomeputative type II secretion protein GspC4e-172603
NC_011750:3584000:360977436097743610733960Escherichia coli IAI39 chromosome, complete genomeputative type II secretion protein GspC1e-165582
NC_011745:3511600:353625335362533537212960Escherichia coli ED1a chromosome, complete genomeputative type II secretion protein GspC3e-164577
NC_012967:3012317:303902430390243039854831Escherichia coli B str. REL606 chromosome, complete genomeputative type II secretion protein GspC2e-144511
NC_008563:3362058:338865133886513389493843Escherichia coli APEC O1, complete genomeputative type II secretion protein GspC7e-141499
NC_007946:3289151:331574433157443316574831Escherichia coli UTI89, complete genomehypothetical type II secretion protein GspC2e-139495
NC_011742:3277941:330344333034433304273831Escherichia coli S88 chromosome, complete genometype II secretion protein GspC2e-139495
NC_016612:2902628:293422329342232934714492Klebsiella oxytoca KCTC 1686 chromosome, complete genomegeneral secretion pathway protein C3e-1376.3
NC_015061:366552:375930375930376763834Rahnella sp. Y9602 chromosome, complete genomehypothetical protein1e-0654.3
NC_017047:370837:378584378584379429846Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-0654.3