Pre_GI: BLASTP Hits

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Query: NC_008228:776000:784755 Pseudoalteromonas atlantica T6c, complete genome

Start: 784755, End: 785525, Length: 771

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002967:1166965:119035211903521190948597Treponema denticola ATCC 35405, complete genomehypothetical protein9e-36150
NC_014828:2605798:262458426245842625183600Ethanoligenens harbinense YUAN-3 chromosome, complete genomephage protein2e-32139
NC_004722:1804788:182727918272791827866588Bacillus cereus ATCC 14579, complete genomePhage protein3e-31135
NC_009633:2592000:262365926236592624450792Alkaliphilus metalliredigens QYMF chromosome, complete genomehypothetical protein5e-30131
NC_010674:2856997:286231428623142862934621Clostridium botulinum B str. Eklund 17B, complete genomephage protein2e-28125
NC_012914:1851102:187413618741361874708573Paenibacillus sp. JDR-2, complete genomehypothetical protein5e-21101
NC_008463:5246954:525520652552065255913708Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-1479.3
NC_010002:5143869:515265251526525153491840Delftia acidovorans SPH-1, complete genomehypothetical protein7e-1374.3
NC_007929:785875:797586797586798197612Lactobacillus salivarius subsp. salivarius UCC118, complete genomehypothetical protein5e-1271.6
NC_009656:4527457:457748045774804578112633Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein5e-1064.7
NC_017033:1052000:105538910553891056072684Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein2e-0962.8
NC_009255:1344000:134643913464391347131693Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein4e-0961.6