Pre_GI: BLASTP Hits

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Query: NC_008228:3841897:3844805 Pseudoalteromonas atlantica T6c, complete genome

Start: 3844805, End: 3845548, Length: 744

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015497:1287877:133042013304201331217798Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein3e-42172
NC_011663:1709003:174630617463061747091786Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-21102
NC_008322:1595500:162651316265131627298786Shewanella sp. MR-7, complete genomeprotein of unknown function DUF10174e-21102
NC_008321:1523323:155510315551031555888786Shewanella sp. MR-4, complete genomeprotein of unknown function DUF10174e-21101
NC_008750:1659095:167791316779131678698786Shewanella sp. W3-18-1, complete genomeprotein of unknown function DUF10171e-1893.2
NC_016818:3887000:391285339128533913596744Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein4e-1788.6
NC_015061:3840463:390220539022053902948744Rahnella sp. Y9602 chromosome, complete genomehypothetical protein8e-1787.4
NC_017047:3936624:396388039638803964623744Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein1e-1687
NC_008570:3220539:322930532293053230063759Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeputative periplasmic protein1e-1686.7
NC_015633:461143:461143461143462012870Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein2e-1582.8
NC_007492:4310828:433303143330314333762732Pseudomonas fluorescens PfO-1, complete genomehypothetical protein4e-1168.6
NC_016147:1435000:145243014524301453185756Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein3e-0962
NC_012917:1506083:153975815397581540540783Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein2e-0653.1
NC_013421:3279499:327949932794993280281783Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF10176e-0651.2