Pre_GI: BLASTP Hits

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Query: NC_008228:372520:386770 Pseudoalteromonas atlantica T6c, complete genome

Start: 386770, End: 387990, Length: 1221

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013722:3117442:3137356313735631386421287Xanthomonas albilineans, complete genomeputative glycoside transferase protein2e-116419
NC_008322:4000330:4013045401304540142141170Shewanella sp. MR-7, complete genomeN-acylglucosamine 2-epimerase2e-112405
NC_008700:672326:6954656954656966341170Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein5e-109394
NC_016023:1658377:1675426167542616766281203Bacillus coagulans 36D1 chromosome, complete genomeN-acylglucosamine 2-epimerase7e-72271
NC_009380:3734773:3739027373902737403041278Salinispora tropica CNB-440 chromosome, complete genomeN-acylglucosamine 2-epimerase6e-43175
NC_017218:867550:8784818784818797161236Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeN-acylglucosamine 2-epimerase2e-40166
NC_011080:4177443:4191934419193441931751242Salmonella enterica subsp. enterica serovar Newport str. SL254,N-acylglucosamine 2-epimerase8e-38158
NC_015703:5272193:5295151529515152963231173Runella slithyformis DSM 19594 chromosome, complete genomeN-acylglucosamine 2-epimerase3e-1893.2
NC_016815:844350:8476738476738499822310Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequencephosphomannose isomerase5e-1272.8
NC_010175:1531212:1540026154002615411951170Chloroflexus aurantiacus J-10-fl, complete genomeN-acylglucosamine 2-epimerase2e-1170.9
NC_015675:3046852:3063895306389530662192325Mesorhizobium opportunistum WSM2075 chromosome, complete genomemannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase1e-1068.2
NC_006347:1006020:1008610100861010097881179Bacteroides fragilis YCH46, complete genomeputative N-acyl-D-glucosamine 2-epimerase9e-1168.2
NC_010995:3945339:3957249395724939584511203Cellvibrio japonicus Ueda107, complete genomeMannose-6-phosphate isomerase-like protein4e-0963.2
NC_013895:605488:6080766080766092901215Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeN-acylglucosamine 2-epimerase8e-0962
NC_016628:537137:5613775613775625971221Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceN-acylglucosamine 2-epimerase9e-0961.6
NC_019908:2183215:2186474218647421876551182Brachyspira pilosicoli P43/6/78 chromosome, complete genomeN-acyl-D-glucosamine-2-epimerase2e-0860.8
NC_014330:1010000:1026384102638410275651182Brachyspira pilosicoli 95/1000 chromosome, complete genomeN-acyl-D-glucosamine-2-epimerase2e-0860.8
NC_010571:2943369:2976775297677529779861212Opitutus terrae PB90-1, complete genomeN-acylglucosamine 2-epimerase9e-0858.5
NC_019960:1272956:1287779128777912889691191Prevotella dentalis DSM 3688 chromosome 1, complete sequenceN-acyl-D-glucosamine 2-epimerase2e-0757.4
NC_016027:2047954:2091889209188920930401152Gluconacetobacter xylinus NBRC 3288, complete genomemannose-6-phosphate isomerase1e-0654.7