Pre_GI: BLASTP Hits

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Query: NC_008228:3679949:3702385 Pseudoalteromonas atlantica T6c, complete genome

Start: 3702385, End: 3703686, Length: 1302

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000914:135534:1420261420261432341209Rhizobium sp. NGR234 plasmid pNGR234a, complete sequenceFixF3e-1170.1
NC_018000:3009864:3019879301987930214111533Sinorhizobium fredii USDA 257 chromosome, complete genomecps10C: Cps10C5e-1065.9
NC_014618:1752434:1766124176612417686012478Enterobacter cloacae SCF1 chromosome, complete genomecapsular polysaccharide biosynthesis protein3e-0860.5
NC_010501:1518959:1532938153293815347461809Pseudomonas putida W619, complete genomeCapsule polysaccharide biosynthesis protein3e-0757
NC_015376:965000:9824759824759836801206Burkholderia gladioli BSR3 chromosome chromosome 2, completecapsule polysaccharide biosynthesis protein2e-0653.9