Pre_GI: BLASTP Hits

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Query: NC_008228:3679949:3691468 Pseudoalteromonas atlantica T6c, complete genome

Start: 3691468, End: 3692163, Length: 696

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012029:904780:9239299239299255361608Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomephosphoribosylglycinamide formyltransferase1e-1169.7
NC_010556:462500:483692483692484267576Exiguobacterium sibiricum 255-15, complete genomephosphoribosylglycinamide formyltransferase2e-1066.2
NC_009253:2577316:258720325872032587814612Desulfotomaculum reducens MI-1 chromosome, complete genomephosphoribosylglycinamide formyltransferase2e-1065.9
NC_011297:1224749:125031412503141250931618Dictyoglomus thermophilum H-6-12, complete genomephosphoribosylglycinamide formyltransferase1e-0963.5
NC_011661:1411383:143058314305831431200618Dictyoglomus turgidum DSM 6724, complete genomephosphoribosylglycinamide formyltransferase1e-0963.2
NC_013939:148706:172221172221172832612Deferribacter desulfuricans SSM1, complete genomephosphoribosylglycinamide formyltransferase2e-0962.8
NC_011567:238249:261299261299261901603Anoxybacillus flavithermus WK1, complete genomePhosphoribosylglycinamide formyltransferase3e-0962
NC_018704:433402:444832444832445422591Amphibacillus xylanus NBRC 15112, complete genomephosphoribosylglycinamide formyltransferase5e-0961.2
NC_014328:938393:946046946046946660615Clostridium ljungdahlii ATCC 49587 chromosome, complete genomefolate-dependent phosphoribosylglycinamide formyltransferase PurN2e-0859.3
NC_002976:638799:652108652108652674567Staphylococcus epidermidis RP62A, complete genomephosphoribosylglycinamide formyltransferase5e-0858.2
NC_004461:746284:759592759592760158567Staphylococcus epidermidis ATCC 12228, complete genomephosphoribosylglycinamide formyltransferase5e-0858.2
NC_015391:2488450:249891424989142499498585Carnobacterium sp. 17-4 chromosome, complete genomephosphoribosylglycinamide formyltransferase5e-0858.2
NC_007517:2055305:205778620577862058406621Geobacter metallireducens GS-15, complete genomePhosphoribosylglycinamide formyltransferase7e-0857.8
NC_007759:1666967:167196016719601672631672Syntrophus aciditrophicus SB, complete genomephosphoribosylglycinamide formyltransferase6e-0857.8
NC_007493:546000:561822561822562370549Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencePhosphoribosylglycinamide formyltransferase6e-0857.8
NC_005295:1067421:106742110674211068059639Ehrlichia ruminantium str. Welgevonden, complete genomephosphoribosylglycinamide formyltransferase6e-0857.8
NC_010718:464405:482195482195482818624Natranaerobius thermophilus JW/NM-WN-LF, complete genomephosphoribosylglycinamide formyltransferase7e-0857.4
NC_017243:424132:439429439429439989561Brachyspira intermedia PWS/A chromosome, complete genomephosphoribosylglycinamide formyltransferase1e-0757
NC_017095:2058921:206022520602252060830606Fervidobacterium pennivorans DSM 9078 chromosome, complete genomephosphoribosylformylglycinamidine synthase, clade II2e-0756.6
NC_009483:2489000:251013325101332510753621Geobacter uraniireducens Rf4 chromosome, complete genomephosphoribosylglycinamide formyltransferase2e-0756.2
NC_008024:35948:433644336443918555Streptococcus pyogenes MGAS10750, complete genomePhosphoribosylglycinamide formyltransferase2e-0756.2
NC_020164:1784223:178990117899011790467567Staphylococcus warneri SG1, complete genomephosphoribosylglycinamide formyltransferase3e-0755.8
NC_009513:169146:170193170193170765573Lactobacillus reuteri F275, complete genomephosphoribosylglycinamide formyltransferase2e-0755.8
NC_009455:1025915:104753010475301048384855Dehalococcoides sp. BAV1 chromosome, complete genomeformyltetrahydrofolate deformylase2e-0755.8
NC_011979:3045952:304684330468433047457615Geobacter sp. FRC-32, complete genomephosphoribosylglycinamide formyltransferase2e-0755.8
NC_007168:1923723:193137519313751931941567Staphylococcus haemolyticus JCSC1435, complete genomephosphoribosylglycinamide formyltransferase3e-0755.5
NC_012225:1657248:166398116639811664541561Brachyspira hyodysenteriae WA1, complete genomephosphoribosylglycinamide formyltransferase3e-0755.5
NC_016645:797000:816776816776817600825Pyrobaculum sp. 1860 chromosome, complete genomephosphoribosylglycinamide formyltransferase3e-0755.5
NC_011999:728353:747762747762748328567Macrococcus caseolyticus JCSC5402, complete genomephosphoribosylglycinamide formyltransferase4e-0755.1
NC_012925:29353:376903769038241552Streptococcus suis P1/7, complete genomephosphoribosylglycinamide formyltransferase4e-0755.1
NC_009443:29349:376863768638237552Streptococcus suis 98HAH33, complete genomephosphoribosylglycinamide formyltransferase4e-0755.1
NC_012924:29353:376903769038241552Streptococcus suis SC84, complete genomephosphoribosylglycinamide formyltransferase4e-0755.1
NC_012926:30351:376883768838239552Streptococcus suis BM407 chromosome, complete genomephosphoribosylglycinamide formyltransferase4e-0755.1
NC_012039:1399699:141657214165721417144573Campylobacter lari RM2100, complete genomephosphoribosylglycinamide formyltransferase5e-0754.7
NC_017208:256163:316758316758317345588Bacillus thuringiensis serovar chinensis CT-43 chromosome, completephosphoribosylglycinamide formyltransferase7e-0754.3
NC_004193:783958:796247796247796816570Oceanobacillus iheyensis HTE831, complete genomephosphoribosylglycinamide formyltransferase7e-0754.3
NC_006905:2630000:263140526314052632043639Salmonella enterica subsp. enterica serovar Choleraesuis strphosphoribosylglycinamide formyltransferase7e-0754.3
NC_010814:2217153:224647222464722247092621Geobacter lovleyi SZ, complete genomephosphoribosylglycinamide formyltransferase6e-0754.3
NC_006087:2008000:202548320254832026076594Leifsonia xyli subsp. xyli str. CTCB07, complete genome5'-phosphoribosylglycinamide formyltransferase9e-0753.9
NC_014829:443500:456636456636457214579Bacillus cellulosilyticus DSM 2522 chromosome, complete genomephosphoribosylglycinamide formyltransferase9e-0753.9
NC_003485:35971:433874338743941555Streptococcus pyogenes MGAS8232, complete genomephosphoribosylglycinamide formyltransferase1e-0653.9
NC_008022:35983:434724347244026555Streptococcus pyogenes MGAS10270, complete genomePhosphoribosylglycinamide formyltransferase1e-0653.9
NC_002570:2616899:262698426269842627937954Bacillus halodurans C-125, complete genomemethionyl-tRNA formyltransferase1e-0653.5
NC_007296:35661:430774307743631555Streptococcus pyogenes MGAS6180, complete genomephosphoribosylglycinamide formyltransferase1e-0653.5
NC_008023:35663:430794307943633555Streptococcus pyogenes MGAS2096, complete genomePhosphoribosylglycinamide formyltransferase1e-0653.5
NC_008021:35661:431044310443658555Streptococcus pyogenes MGAS9429, complete genomephosphoribosylglycinamide formyltransferase1e-0653.5
NC_014507:1861541:186625318662531866882630Methanoplanus petrolearius DSM 11571 chromosome, complete genomephosphoribosylglycinamide formyltransferase1e-0653.1
NC_014820:71565:929609296093535576Cenarchaeum symbiosum A, complete genomefolate-dependent phosphoribosylglycinamide formyltransferase2e-0653.1
NC_006814:1538175:154605615460561546667612Lactobacillus acidophilus NCFM, complete genomephosphoribosyl glycinamide formyltransferase2e-0652.4
NC_010380:124655:130971130971131516546Streptococcus pneumoniae Hungary19A-6, complete genomephosphoribosylglycinamide formyltransferase3e-0652.4
NC_002516:1031386:103209510320951032763669Pseudomonas aeruginosa PAO1, complete genomephosphoribosylglycinamide formyltransferase3e-0652.4
NC_014498:99015:105331105331105876546Streptococcus pneumoniae 670-6B chromosome, complete genomephosphoribosylglycinamide formyltransferase4e-0652
NC_013928:9494:393893938939943555Streptococcus mutans NN2025, complete genomephosphoribosylglycinamide formyltransferase3e-0652
NC_020063:1194000:121508112150811215725645Enterobacteriaceae bacterium strain FGI 57, complete genomeformyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase4e-0651.6
NC_010571:2041277:204656620465662047162597Opitutus terrae PB90-1, complete genomephosphoribosylglycinamide formyltransferase5e-0651.2
NC_020418:2718500:273870227387022739334633Morganella morganii subsp. morganii KT, complete genomePhosphoribosylglycinamide formyltransferase6e-0651.2
NC_010545:404111:416079416079416978900Corynebacterium urealyticum DSM 7109, complete genomeputative formyltransferase7e-0650.8
NC_015422:3836911:385902138590213859602582Alicycliphilus denitrificans K601 chromosome, complete genomephosphoribosylglycinamide formyltransferase8e-0650.8
NC_007164:2046937:206666720666672067611945Corynebacterium jeikeium K411, complete genomeputative formyltransferase9e-0650.4