Pre_GI: BLASTP Hits

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Query: NC_008228:1404126:1409986 Pseudoalteromonas atlantica T6c, complete genome

Start: 1409986, End: 1411569, Length: 1584

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015497:3739556:3764224376422437658041581Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily0870
NC_018679:3197347:3218447321844732200151569Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completelipopolysaccharide biosynthesis protein7e-175613
NC_015554:817500:8231338231338247011569Alteromonas sp. SN2 chromosome, complete genomelipopolysaccharide biosynthesis1e-168593
NC_013960:3326955:3337202333720233388061605Nitrosococcus halophilus Nc4 chromosome, complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily4e-101369
NC_014315:1956695:1964701196470119662961596Nitrosococcus watsoni C-113 chromosome, complete genomepolysaccharide chain length determinant protein3e-92339
NC_014910:755192:7736587736587752201563Alicycliphilus denitrificans BC chromosome, complete genomepolysaccharide chain length determinant protein, pep-cterm locus subfamily1e-84314
NC_015422:704500:7129787129787145401563Alicycliphilus denitrificans K601 chromosome, complete genomepolysaccharide chain length determinant protein1e-84313
NC_008789:1641774:1648674164867416502181545Halorhodospira halophila SL1, complete genomelipopolysaccharide biosynthesis7e-83308
NC_007298:2568851:2585030258503025864721443Dechloromonas aromatica RCB, complete genomeLipopolysaccharide biosynthesis2e-73277
NC_010524:3914880:3921737392173739232901554Leptothrix cholodnii SP-6, complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily3e-60233
NC_015572:1421782:1444250144425014457791530Methylomonas methanica MC09 chromosome, complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily1e-58227
NC_007645:2779381:2786063278606327875801518Hahella chejuensis KCTC 2396, complete genomeuncharacterized protein involved in exopolysaccharide biosynthesis8e-41168
NC_012918:2896671:2896671289667128981701500Geobacter sp. M21 chromosome, complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily3e-34146
NC_011146:1998981:2040949204094920424481500Geobacter bemidjiensis Bem, complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily4e-34146
NC_010995:4083960:4102041410204141035581518Cellvibrio japonicus Ueda107, complete genomepolysaccharide chain length determinant protein3e-29130
NC_009483:2640403:2734589273458927361121524Geobacter uraniireducens Rf4 chromosome, complete genomelipopolysaccharide biosynthesis protein4e-29129
NC_018868:1960542:1994252199425219957601509Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomepolysaccharide chain length determinant protein2e-28127
NC_007517:2241104:2270200227020022717561557Geobacter metallireducens GS-15, complete genomeLipopolysaccharide biosynthesis2e-28127
NC_015388:269301:3104843104843122231740Desulfobacca acetoxidans DSM 11109 chromosome, complete genomelipopolysaccharide biosynthesis protein5e-24112
NC_011769:820521:8297198297198311611443Desulfovibrio vulgaris str. 'Miyazaki F', complete genomepolysaccharide chain length determinant protein, PEP-CTERM locus subfamily4e-21103
NC_017030:3668146:3687987368798736893961410Corallococcus coralloides DSM 2259 chromosome, complete genomechain length determinant family protein8e-2099
NC_016631:4472987:4471515447151544729901476Granulicella mallensis MP5ACTX8 chromosome, complete genomelipopolysaccharide biosynthesis protein2e-1997.8
NC_014216:2027017:2027017202701720285821566Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomelipopolysaccharide biosynthesis protein5e-1892.8
NC_012108:2194251:2214483221448322161291647Desulfobacterium autotrophicum HRM2, complete genomeGumC12e-1790.9
NC_011884:5019500:5021572502157250238242253Cyanothece sp. PCC 7425, complete genomecapsular exopolysaccharide family6e-1686.3
NC_014355:2321957:2352381235238123541501770Candidatus Nitrospira defluvii, complete genomeputative lipopolysaccharide biosynthesis protein7e-1685.9
NC_014654:646500:6575846575846590471464Halanaerobium sp. 'sapolanicus' chromosome, complete genomelipopolysaccharide biosynthesis protein1e-1378.2
NC_007514:904565:9219619219619243812421Chlorobium chlorochromatii CaD3, complete genomeUncharacterized protein involved in exopolysaccharide biosynthesis-like1e-1171.6
NC_013730:4914000:4922326492232649246052280Spirosoma linguale DSM 74, complete genomecapsular exopolysaccharide family2e-1171.2
NC_017068:638868:6441566441566455051350Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein3e-1170.1
NC_017068:2827568:2847199284719928485451347Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-1067.4
NC_012785:20454:1823218232204572226Kosmotoga olearia TBF 19.5.1, complete genomecapsular exopolysaccharide family1e-0861.6
NC_016751:1227495:1255218125521812573772160Marinitoga piezophila KA3 chromosome, complete genomecapsular exopolysaccharide biosynthesis protein2e-0861.2
NC_013037:48900:7975379753821402388Dyadobacter fermentans DSM 18053, complete genomecapsular exopolysaccharide family1e-0758.5
NC_008825:2889933:2906730290673029081571428Methylibium petroleiphilum PM1, complete genomechain length determinant protein2e-0757.8
NC_017326:1084314:1091761109176110933171557Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequencepolysaccharide biosynthesis-related protein3e-0757
NC_015596:1556007:1563457156345715650131557Sinorhizobium meliloti AK83 chromosome 2, complete sequencelipopolysaccharide biosynthesis protein3e-0757
NC_019940:2931500:2943788294378829460762289Thioflavicoccus mobilis 8321 chromosome, complete genomecapsular exopolysaccharide biosynthesis protein2e-0654.3
NC_014973:1071500:1083730108373010851871458Geobacter sp. M18 chromosome, complete genomelipopolysaccharide biosynthesis protein2e-0654.3
NC_010475:1582856:1582856158285615851262271Synechococcus sp. PCC 7002, complete genomeUncharacterized protein involved in exopolysaccharide biosynthesis3e-0653.9
NC_015914:917124:9185379185379209032367Cyclobacterium marinum DSM 745 chromosome, complete genomecapsular exopolysaccharide family protein4e-0653.5
NC_005125:4524868:4542641454264145449172277Gloeobacter violaceus PCC 7421, complete genomehypothetical protein4e-0653.5
NC_014973:2693672:2711375271137527136572283Geobacter sp. M18 chromosome, complete genomecapsular exopolysaccharide family5e-0653.1
NC_011026:3009500:3027576302757630299722397Chloroherpeton thalassium ATCC 35110, complete genomecapsular exopolysaccharide family5e-0653.1
NC_009925:4864367:4876703487670348793242622Acaryochloris marina MBIC11017, complete genomelipopolysaccharide biosynthesis protein, putative6e-0652.8