Pre_GI: BLASTP Hits

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Query: NC_008149:2652825:2666326 Yersinia pestis Nepal516, complete genome

Start: 2666326, End: 2666565, Length: 240

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003143:1973867:198347719834771983716240Yersinia pestis CO92, complete genomehypothetical protein4e-39159
NC_008800:1942000:195057119505711950810240Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-36150
NC_020064:2779864:278853627885362788775240Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF2766)1e-31135
NC_017047:3212000:322641832264183226663246Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein9e-31132
NC_015061:3147691:316181631618163162061246Rahnella sp. Y9602 chromosome, complete genomehypothetical protein9e-31132
NC_016818:3148000:316234031623403162585246Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein9e-31132
CP002797:1960000:196106619610661961317252Escherichia coli NA114, complete genomehypothetical protein1e-27121
NC_010159:1710268:172375917237591723911153Yersinia pestis Angola, complete genome1e-2098.2