Pre_GI: BLASTP Hits

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Query: NC_008149:2652825:2665144 Yersinia pestis Nepal516, complete genome

Start: 2665144, End: 2665419, Length: 276

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003143:1973867:198462319846231984898276Yersinia pestis CO92, complete genomehypothetical protein5e-37152
NC_010159:1710268:172256517225651722825261Yersinia pestis Angola, complete genomehypothetical protein8e-34142
NC_008800:1942000:195182519518251952100276Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-25114
NC_017047:3212000:322191032219103222182273Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein7e-1475.9
NC_015061:3147691:315730831573083157580273Rahnella sp. Y9602 chromosome, complete genomehypothetical protein7e-1475.9
NC_016818:3148000:315784031578403158112273Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein1e-1375.5
NC_012912:2216749:223254422325442232834291Dickeya zeae Ech1591, complete genomehypothetical protein2e-0857.8
NC_014500:2589089:259640425964042596694291Dickeya dadantii 3937 chromosome, complete genomehypothetical protein2e-0857.8
NC_020064:2779864:278757327875732787851279Serratia marcescens FGI94, complete genomehypothetical protein3e-0857.4