Pre_GI: BLASTP Hits

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Query: NC_008149:2652825:2664228 Yersinia pestis Nepal516, complete genome

Start: 2664228, End: 2664539, Length: 312

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003143:1973867:198550319855031985814312Yersinia pestis CO92, complete genomehypothetical protein2e-48190
NC_008800:1942000:195268419526841952953270Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein3e-42170
NC_010159:1710268:172164917216491721894246Yersinia pestis Angola, complete genomehypothetical protein2e-41167
NC_017047:3212000:322108632210863221322237Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein4e-33139
NC_016818:3148000:315701231570123157248237Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein4e-33139
NC_015061:3147691:315648431564843156720237Rahnella sp. Y9602 chromosome, complete genomehypothetical protein4e-33139
NC_020064:2779864:278669827866982786934237Serratia marcescens FGI94, complete genomehypothetical protein1e-32138