Pre_GI: BLASTP Hits

Some Help

Query: NC_008148:672608:686182 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 686182, End: 686865, Length: 684

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014212:670996:673613673613674317705Meiothermus silvanus DSM 9946 chromosome, complete genomeiron (metal) dependent repressor, DtxR family3e-41168
NC_018720:357716:362611362611363312702Bifidobacterium asteroides PRL2011 chromosome, complete genomeDtxR family transcriptional regulator3e-38158
NC_014215:2259290:226154722615472262224678Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Iron dependent repressor6e-37154
NC_015954:2764919:280424728042472804924678Halophilic archaeon DL31 chromosome, complete genomeDtxR family iron (metal) dependent repressor2e-35149
NC_021064:303635:325267325267325935669Propionibacterium avidum 44067, complete genomeMn-dependent transcriptional regulator1e-34146
NC_016783:537717:550061550061550675615Corynebacterium diphtheriae INCA 402 chromosome, complete genomeiron-dependent repressor ideR5e-32137
NC_016782:537412:545910545910546524615Corynebacterium diphtheriae 241 chromosome, complete genomeiron-dependent repressor ideR5e-32137
NC_016786:533537:545881545881546495615Corynebacterium diphtheriae HC01 chromosome, complete genomeiron-dependent repressor ideR5e-32137
NC_016788:527351:535848535848536462615Corynebacterium diphtheriae HC04 chromosome, complete genomeiron-dependent repressor ideR5e-32137
NC_016510:2175000:219251721925172193182666Flavobacterium columnare ATCC 49512 chromosome, complete genomemetal-dependent transcriptional regulator5e-32137
NC_014550:3377834:342065334206533421117465Arthrobacter arilaitensis Re117, complete genome4e-31134
NC_013928:174500:178504178504179157654Streptococcus mutans NN2025, complete genomemetal-dependent transcriptional regulator6e-28124
NC_014151:813755:842050842050842739690Cellulomonas flavigena DSM 20109 chromosome, complete genomeiron (metal) dependent repressor, DtxR family1e-21102
NC_013798:1778758:179922317992231799873651Streptococcus gallolyticus UCN34, complete genomeputative iron-dependent transcriptional regulator7e-21100
NC_012622:1333000:135303013530301353668639Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeDtxR family iron (metal) dependent repressor7e-21100
NC_008536:2775517:279104327910432791699657Solibacter usitatus Ellin6076, complete genomeiron (metal) dependent repressor, DtxR family1e-2099.8
NC_014408:1193239:121558712155871215982396Methanothermobacter marburgensis str. Marburg chromosome, completemetal-dependent transcriptional regulator3e-2099
NC_002689:979191:989857989857990507651Thermoplasma volcanium GSS1, complete genomeMetal-dependent transcription regulator3e-1891.7
NC_015656:132633:138420138420139181762Frankia symbiont of Datisca glomerata chromosome, complete genomeDtxR family iron (metal) dependent repressor4e-1684.7
NC_014550:615609:622233622233622928696Arthrobacter arilaitensis Re117, complete genomeiron-dependent repressor IdeR5e-1581.3
NC_013922:2463299:247976224797622480199438Natrialba magadii ATCC 43099 chromosome, complete genomeiron (metal) dependent repressor, DtxR family6e-1581.3
NC_014666:7838500:784342878434287844105678Frankia sp. EuI1c chromosome, complete genomeiron (metal) dependent repressor, DtxR family1e-1480.1
NC_017317:1463466:146346614634661464146681Corynebacterium ulcerans 809 chromosome, complete genomeDtxR-family transcription regulator4e-1478.6
NC_015683:1467000:146716514671651467845681Corynebacterium ulcerans BR-AD22 chromosome, complete genomeDtxR family transcription regulator4e-1478.6
NC_002935:1378566:143133514313351432015681Corynebacterium diphtheriae NCTC 13129, complete genomediphtheria toxin repressor1e-1376.6
NC_016802:1317365:140446814044681405148681Corynebacterium diphtheriae HC02 chromosome, complete genomediphtheria toxin repressor1e-1376.6
NC_016799:1439000:147148714714871472167681Corynebacterium diphtheriae 31A chromosome, complete genomediphtheria toxin repressor1e-1376.6
NC_016782:1385800:141967714196771420357681Corynebacterium diphtheriae 241 chromosome, complete genomediphtheria toxin repressor1e-1376.6
NC_016783:1397975:144026914402691440949681Corynebacterium diphtheriae INCA 402 chromosome, complete genomediphtheria toxin repressor1e-1376.6
NC_016785:1357500:139782913978291398509681Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomediphtheria toxin repressor1e-1376.6
NC_016786:1359064:141994214199421420622681Corynebacterium diphtheriae HC01 chromosome, complete genomediphtheria toxin repressor1e-1376.6
NC_016787:1350676:141125514112551411935681Corynebacterium diphtheriae HC03 chromosome, complete genomediphtheria toxin repressor1e-1376.6
NC_016801:1422500:146147114614711462151681Corynebacterium diphtheriae C7 (beta) chromosome, complete genomediphtheria toxin repressor1e-1376.6
NC_016800:1411000:144781814478181448498681Corynebacterium diphtheriae BH8 chromosome, complete genomediphtheria toxin repressor1e-1376.6
NC_016790:1345638:138732213873221388002681Corynebacterium diphtheriae VA01 chromosome, complete genomediphtheria toxin repressor1e-1376.6
NC_016789:1432000:146518114651811465861681Corynebacterium diphtheriae PW8 chromosome, complete genomediphtheria toxin repressor1e-1376.6
NC_016788:1376000:141472014147201415400681Corynebacterium diphtheriae HC04 chromosome, complete genomediphtheria toxin repressor1e-1376.6
NC_013158:363222:372430372430372861432Halorhabdus utahensis DSM 12940, complete genomeiron (metal) dependent repressor, DtxR family2e-1376.3
NC_014329:1328949:132894913289491329629681Corynebacterium pseudotuberculosis FRC41 chromosome, completeDtxR family transcriptional regulator3e-1375.5
NC_016781:1327516:132876913287691329449681Corynebacterium pseudotuberculosis 3/99-5 chromosome, completediphtheria toxin repressor3e-1375.5
NC_016932:1309644:131365413136541314334681Corynebacterium pseudotuberculosis 316 chromosome, complete genomeDiphtheria toxin repressor3e-1375.5
NC_017031:1328500:132875513287551329435681Corynebacterium pseudotuberculosis P54B96 chromosome, completeDiphtheria toxin repressor3e-1375.5
NC_017300:1326331:132633113263311327011681Corynebacterium pseudotuberculosis 1002 chromosome, completeDiphtheria toxin repressor3e-1375.5
NC_017301:1328500:132863613286361329316681Corynebacterium pseudotuberculosis C231 chromosome, completeDiphtheria toxin repressor3e-1375.5
NC_017303:1328777:132877713287771329457681Corynebacterium pseudotuberculosis I19 chromosome, complete genomeDiphtheria toxin repressor3e-1375.5
NC_017305:1326351:132635113263511327031681Corynebacterium pseudotuberculosis PAT10 chromosome, completeDiphtheria toxin repressor3e-1375.5
NC_015954:2764919:278644227864422786882441Halophilic archaeon DL31 chromosome, complete genomeDtxR family iron (metal) dependent repressor5e-1374.3
NC_003552:4277937:427936842793684279850483Methanosarcina acetivorans C2A, complete genomehypothetical protein8e-1373.9
NC_014363:114239:156802156802157224423Olsenella uli DSM 7084 chromosome, complete genomeiron (metal) dependent repressor, DtxR family4e-1271.6
NC_003901:1568000:159004015900401590489450Methanosarcina mazei Go1, complete genomeIron-dependent repressor6e-1271.2
NC_014219:2491021:250366525036652504102438Bacillus selenitireducens MLS10 chromosome, complete genomeiron (metal) dependent repressor, DtxR family9e-1270.5
NC_012883:104987:122828122828123253426Thermococcus sibiricus MM 739, complete genomeManganese-dependent transcription regulator1e-1170.1
NC_014378:4428:204002040020885486Acetohalobium arabaticum DSM 5501 chromosome, complete genomeiron (metal) dependent repressor, DtxR family2e-1169.3
NC_013741:27353:417484174842329582Archaeoglobus profundus DSM 5631, complete genomeiron (metal) dependent repressor, DtxR family6e-1167.8
NC_014328:3747973:375371137537113754181471Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative metal dependent transcriptional regulator9e-1167
NC_008554:4586543:461032446103244610857534Syntrophobacter fumaroxidans MPOB, complete genomeiron (metal) dependent repressor, DtxR family1e-1067
NC_010003:605961:624080624080624751672Petrotoga mobilis SJ95, complete genomeiron (metal) dependent repressor, DtxR family1e-1066.6
NC_013204:1759985:177898117789811779364384Eggerthella lenta DSM 2243, complete genomeiron (metal) dependent repressor, DtxR family8e-1063.9
NC_014820:1057826:107407710740771074523447Cenarchaeum symbiosum A, complete genomeMn-dependent transcriptional regulator9e-1063.9
NC_013203:1447340:146155614615561461984429Atopobium parvulum DSM 20469, complete genomeiron (metal) dependent repressor, DtxR family1e-0963.5
NC_015574:806762:820865820865821323459Methanobacterium sp. SWAN-1 chromosome, complete genomeiron (metal) dependent repressor, DtxR family1e-0963.2
NC_002939:1505701:151079915107991511443645Geobacter sulfurreducens PCA, complete genomeiron-dependent repressor, putative2e-0962.8
NC_020389:1346358:136442013644201364803384Methanosarcina mazei Tuc01, complete genomeIron dependent repressor9e-0960.5
NC_015519:801929:801929801929802411483Tepidanaerobacter sp. Re1 chromosome, complete genomeiron (metal) dependent repressor, DtxR family2e-0858.9
NC_014376:3593500:360909336090933609512420Clostridium saccharolyticum WM1 chromosome, complete genomeiron dependent repressor3e-0858.9
NC_015172:1471501:150546215054621505839378Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeiron (metal) dependent repressor, DtxR family4e-0858.5
NC_009776:617532:633366633366633743378Ignicoccus hospitalis KIN4/I, complete genomeiron dependent repressor5e-0857.8
NC_009253:2927802:294803529480352948469435Desulfotomaculum reducens MI-1 chromosome, complete genomeiron dependent repressor5e-0857.8
NC_002936:67896:923739237393089717Dehalococcoides ethenogenes 195, complete genomeiron dependent repressor, putative1e-0756.6
NC_013410:2037840:205849220584922058926435Fibrobacter succinogenes subsp. succinogenes S85 chromosome,DtxR family iron (metal) dependent repressor2e-0756.2
NC_015555:211935:229660229660230130471Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeiron (metal) dependent repressor, DtxR family4e-0755.1
NC_008698:903759:922126922126922572447Thermofilum pendens Hrk 5, complete genomeiron dependent repressor5e-0754.7
NC_006138:3355028:335673633567363357242507Desulfotalea psychrophila LSv54, complete genomeiron-dependent repressor2e-0653.1
NC_013364:928486:933261933261933728468Escherichia coli O111:H- str. 11128, complete genomeDNA-binding transcriptional regulator2e-0652.8
NC_013353:922937:927712927712928179468Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional regulator of mntH2e-0652.8
AP010958:922937:927712927712928179468Escherichia coli O103:H2 str. 12009 DNA, complete genomeDNA-binding transcriptional regulator of mntH2e-0652.8
NC_014011:1264165:126849512684951269133639Aminobacterium colombiense DSM 12261 chromosome, complete genomeiron (metal) dependent repressor, DtxR family2e-0652.4
NC_013165:2240377:224037722403772240811435Slackia heliotrinireducens DSM 20476, complete genomeMn-dependent transcriptional regulator2e-0652.4
NC_015385:456000:476559476559476933375Treponema succinifaciens DSM 2489 chromosome, complete genomeiron (metal) dependent repressor, DtxR family1e-0550.4