Pre_GI: BLASTP Hits

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Query: NC_008148:1567703:1584766 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 1584766, End: 1585977, Length: 1212

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013406:3650300:3656916365691636581541239Paenibacillus sp. Y412MC10 chromosome, complete genomecyanate transporter2e-33143
NC_017195:517344:5368515368515380081158Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeinner membrane transport protein YeaN1e-32140
NC_016048:2873669:2892227289222728935341308Oscillibacter valericigenes Sjm18-20, complete genomemajor facilitator superfamily transporter1e-24114
NC_015172:1334958:1363883136388313650851203Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomemajor facilitator superfamily MFS_11e-24114
NC_016612:5231065:5256075525607552572651191Klebsiella oxytoca KCTC 1686 chromosome, complete genometransporter, major facilitator family protein1e-21104
NC_020209:47504:9037290372916191248Pseudomonas poae RE*1-1-14, complete genometransporter, major facilitator family protein6e-2099
NC_015172:3095781:3100390310039031015921203Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomemajor facilitator superfamily MFS_19e-2098.2
NC_007963:3574000:3587228358722835884511224Chromohalobacter salexigens DSM 3043, complete genomemajor facilitator superfamily MFS_12e-1893.6
NC_001263:243000:2617332617332628811149Deinococcus radiodurans R1 chromosome 1, complete sequenceCynX-related transport protein, putative4e-1892.8
NC_007963:3113739:3131163313116331323591197Chromohalobacter salexigens DSM 3043, complete genomemajor facilitator superfamily MFS_18e-1788.6
NC_005773:1333863:1333863133386313350921230Pseudomonas syringae pv. phaseolicola 1448A, complete genomecyanate MFS transporter5e-1582.4
NC_013850:3303500:3304908330490833060921185Klebsiella variicola At-22 chromosome, complete genomecyanate transporter2e-1480.5
NC_014121:2514544:2533291253329125344661176Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecyanate transporter2e-1377
NC_015635:3860570:3889579388957938908561278Microlunatus phosphovorus NM-1, complete genomeputative major facilitator superfamily transporter4e-1376.3
NC_011832:913994:9537649537649550381275Candidatus Methanosphaerula palustris E1-9c, complete genomemajor facilitator superfamily MFS_14e-1375.9
NC_011883:487187:5074035074035085991197Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,major facilitator superfamily MFS_19e-1168.2
NC_019673:7797666:7806218780621878074711254Saccharothrix espanaensis DSM 44229 complete genomePermease, MFS-type1e-1068.2
NC_018524:2423016:2444624244462424458261203Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomemajor Facilitator Superfamily protein2e-0963.5
NC_021175:2063611:2082401208240120835731173Streptococcus oligofermentans AS 1.3089, complete genometransporter2e-0860.5
NC_008228:2295841:2310185231018523114891305Pseudoalteromonas atlantica T6c, complete genomemajor facilitator superfamily MFS_13e-0756.6