Pre_GI: BLASTP Hits

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Query: NC_008146:861319:937061 Mycobacterium sp. MCS, complete genome

Start: 937061, End: 938503, Length: 1443

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:868623:9427759427759443101536Mycobacterium sp. KMS, complete genomeconserved hypothetical protein0854
NC_008596:1302000:1354095135409513556331539Mycobacterium smegmatis str. MC2 155, complete genomehypothetical protein6e-29129
NC_016906:181254:1860811860811875531473Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein4e-28126
NC_018581:2768743:277599927759992776808810Gordonia sp. KTR9 chromosome, complete genomehypothetical protein2e-23110
NC_014623:6651798:6677958667795866801352178Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein6e-1272.4
NC_015381:2859000:2906549290654929079971449Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein5e-1169.3
NC_009617:3263413:3269030326903032704661437Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein2e-1067.8
NC_012793:1718000:1729792172979217312941503Geobacillus sp. WCH70, complete genomehypothetical protein3e-1067
NC_012673:2535427:2566208256620825691832976Exiguobacterium sp. AT1b, complete genomehypothetical protein6e-1065.9
NC_002927:506183:5160365160365174691434Bordetella bronchiseptica RB50, complete genomehypothetical protein8e-1065.5
NC_008322:1186000:1199709119970912011421434Shewanella sp. MR-7, complete genomehypothetical protein8e-1065.5
NC_015674:1114915:1122144112214411244952352Helicobacter bizzozeronii CIII-1, complete genomehypothetical protein1e-0862
NC_014311:3076519:309878030987803099577798Ralstonia solanacearum PSI07 chromosome, complete genomesir2 domain2e-0861.2
NC_007520:407627:4215274215274229721446Thiomicrospira crunogena XCL-2, complete genomehypothetical protein2e-0757.8
NC_017986:5867782:5874074587407458776043531Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-0757
NC_008260:2142311:215052021505202151308789Alcanivorax borkumensis SK2, complete genomeSIR2 family protein9e-0755.5
NC_020541:2694836:2705471270547127069011431Rhodanobacter sp. 2APBS1, complete genomehypothetical protein1e-0655.1
NC_015572:4063150:4064370406437040661961827Methylomonas methanica MC09 chromosome, complete genomehypothetical protein1e-0654.7
NC_013456:3011518:3019889301988930234883600Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein2e-0654.3