Pre_GI: BLASTP Hits

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Query: NC_008146:861319:924739 Mycobacterium sp. MCS, complete genome

Start: 924739, End: 925047, Length: 309

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:868623:933468933468933845378Mycobacterium sp. KMS, complete genomedeath-on-curing family protein6e-49192
NC_016943:2054688:206434620643462064714369Blastococcus saxobsidens DD2, complete genomecytotoxic translational repressor of toxin-antitoxin stability system, Putative toxin of TAS system3e-25113
NC_018681:7692560:770037177003717700766396Nocardia brasiliensis ATCC 700358 chromosome, complete genomedeath-on-curing protein1e-21102
NC_009338:5537473:555592255559225556308387Mycobacterium gilvum PYR-GCK chromosome, complete genomedeath-on-curing protein2e-21100
NC_007777:1296000:130365613036561304036381Frankia sp. CcI3, complete genomeDeath-on-curing protein7e-2095.9
NC_014159:37920:564145641456809396Tsukamurella paurometabola DSM 20162 plasmid pTpau01, completefilamentation induced by cAMP protein Fic8e-1992.4
NC_013757:3897413:389798838979883898359372Geodermatophilus obscurus DSM 43160, complete genomedeath-on-curing family protein2e-1788.2
NC_014151:657382:667158667158667532375Cellulomonas flavigena DSM 20109 chromosome, complete genomedeath-on-curing family protein6e-1786.3
NC_017955:4075804:407713740771374077508372Modestobacter marinus, complete genomecytotoxic translational repressor of toxin-antitoxin stability system, Putative toxin of TAS system8e-1682.4
NC_010842:2310756:232613823261382326536399Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeprophage maintenance system killer protein2e-1580.9
NC_010602:2244729:232075223207522321150399Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'putative death-on-curing protein DOC2e-1580.9
NC_013205:576583:604751604751605125375Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,4e-1373.6
NC_011891:3369170:338730133873013387702402Anaeromyxobacter dehalogenans 2CP-1, complete genomedeath-on-curing family protein8e-1268.9
NC_004557:2037500:205679620567962057179384Clostridium tetani E88, complete genomedeath on curing protein1e-1065.1
NC_013406:303218:333178333178333540363Paenibacillus sp. Y412MC10 chromosome, complete genomedeath-on-curing family protein5e-1063.2
NC_013740:1218429:124823212482321248609378Acidaminococcus fermentans DSM 20731, complete genomedeath-on-curing family protein2e-0961.2
NC_015387:1278471:129510612951061295543438Marinithermus hydrothermalis DSM 14884 chromosome, complete genomedeath-on-curing family protein1e-0858.2
NC_011899:12699:296412964130039399Halothermothrix orenii H 168, complete genomedeath-on-curing family protein2e-0857.8
NC_011726:3051408:306930330693033069707405Cyanothece sp. PCC 8801, complete genomedeath-on-curing family protein2e-0754.7
NC_013203:202008:226081226081226479399Atopobium parvulum DSM 20469, complete genome2e-0754.7
NC_011892:77975:838708387084250381Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completedeath-on-curing family protein5e-0753.1
NC_007677:3469661:347571734757173476094378Salinibacter ruber DSM 13855, complete genomedeath on curing protein3e-0650.8