Pre_GI: BLASTP Hits

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Query: NC_008146:861319:914412 Mycobacterium sp. MCS, complete genome

Start: 914412, End: 916103, Length: 1692

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:868623:9231419231419248321692Mycobacterium sp. KMS, complete genomeconserved hypothetical protein01033
NC_016906:181254:2298072298072314591653Gordonia polyisoprenivorans VH2 chromosome, complete genomenuclease-related domain-containing protein0636
NC_017955:4075804:4085074408507440867141641Modestobacter marinus, complete genomenuclease8e-125447
NC_014151:3687612:3692966369296636946331668Cellulomonas flavigena DSM 20109 chromosome, complete genomeNERD domain protein3e-82306
NC_013526:567500:5709215709215726001680Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeNERD domain protein4e-39163
NC_011770:2499432:2515459251545925171831725Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-29130
NC_017955:4075804:407779540777954078232438Modestobacter marinus, complete genomenuclease2e-28127
NC_010622:249625:2709012709012726401740Burkholderia phymatum STM815 chromosome 1, complete sequenceNERD domain protein8e-24112
NC_015711:2050360:2064044206404420657621719Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein7e-23109
NC_011958:1031592:103742410374241038389966Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein2e-20101
NC_015684:362236:3735403735403751471608Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein1e-1998.6
NC_011386:136223:1535621535621551691608Oligotropha carboxidovorans OM5, complete genomenuclease-related domain family1e-1998.6
NC_008435:2368000:2394634239463423963551722Rhodopseudomonas palustris BisA53, complete genomehypothetical protein4e-1790.1
NC_016609:6750111:6766505676650567681961692Niastella koreensis GR20-10 chromosome, complete genomeNERD domain-containing protein2e-1481.3
NC_017078:247045:2618732618732636031731Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,hypothetical protein6e-1479.3
NC_020126:5558613:5570088557008855718271740Myxococcus stipitatus DSM 14675, complete genomehypothetical protein6e-1169.7
NC_016943:3352413:3363261336326133647541494Blastococcus saxobsidens DD2, complete genomeputative NERD domain protein1e-0758.5
NC_008781:2883968:289717628971762898150975Polaromonas naphthalenivorans CJ2, complete genomehypothetical protein3e-0757.4
NC_012791:4794362:4834272483427248358731602Variovorax paradoxus S110 chromosome 1, complete genomeAAA ATPase6e-0756.2
NC_007511:1300978:1302594130259413042611668Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein5e-0653.5