Pre_GI: BLASTP Hits

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Query: NC_008146:5106775:5113430 Mycobacterium sp. MCS, complete genome

Start: 5113430, End: 5115007, Length: 1578

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014814:1425500:1432133143213314336951563Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein0709
NC_009077:4671417:4678478467847846797611284Mycobacterium sp. JLS, complete genomeputative ATP-binding protein0691
NC_008705:5144433:5151088515108851522211134Mycobacterium sp. KMS, complete genomeputative ATP-binding protein0672
NC_008705:5144433:515360851536085154090483Mycobacterium sp. KMS, complete genomeputative ATP-binding protein2e-88327
NC_018750:3249756:3259601325960132612651665Streptomyces venezuelae ATCC 10712, complete genomeputative ATP-binding protein1e-75284
NC_015576:1442713:1444345144434514462671923Mycobacterium sp. JDM601 chromosome, complete genomeputative ATP-binding protein2e-74280
NC_016114:3008500:3031298303129830327701473Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeATP-binding protein1e-46187
NC_015957:10403997:1041797310417973104194481476Streptomyces violaceusniger Tu 4113 chromosome, complete genomeATP/GTP-binding protein2e-44181
NC_016111:3736254:3743883374388337454841602Streptomyces cattleya NRRL 8057, complete genomeATP-binding protein2e-43177
NC_013929:6251989:6269276626927662707541479Streptomyces scabiei 87.22 chromosome, complete genomeATP/GTP-binding protein3e-43176
NC_018750:2118907:2139879213987921413541476Streptomyces venezuelae ATCC 10712, complete genomeputative ATP-binding protein5e-43176
NC_003155:4592000:4592396459239645938711476Streptomyces avermitilis MA-4680, complete genomeATP-binding protein2e-42174
NC_010572:4181403:4202513420251342039881476Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ATP-binding protein1e-42174
NC_007498:919697:9421829421829437891608Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein5e-42172
NC_008639:2358592:2399324239932424012341911Chlorobium phaeobacteroides DSM 266, complete genomehypothetical protein1e-38161
NC_014974:1570037:1583237158323715851201884Thermus scotoductus SA-01 chromosome, complete genomebifunctional DNA primase/polymerase3e-38160
NC_009925:4271140:4271140427114042741993060Acaryochloris marina MBIC11017, complete genomehypothetical protein2e-37157
NC_009077:4671417:468093946809394681307369Mycobacterium sp. JLS, complete genomeputative ATP-binding protein8e-35148
NC_013223:1848689:1859647185964718622472601Desulfohalobium retbaense DSM 5692, complete genomehypothetical protein2e-32140
NC_015942:1047576:1065573106557310669251353Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein2e-29130
NC_012796:1645856:1660417166041716618861470Desulfovibrio magneticus RS-1, complete genomehypothetical protein4e-28126
NC_012796:985000:1001884100188410035211638Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-27124
NC_014844:3469848:3480497348049734815941098Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein3e-26120
NC_012796:4075583:4168536416853641701581623Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-24114
NC_012796:4075583:4173824417382441752781455Desulfovibrio magneticus RS-1, complete genomehypothetical protein4e-20100