Pre_GI: BLASTP Hits

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Query: NC_008146:3349415:3370992 Mycobacterium sp. MCS, complete genome

Start: 3370992, End: 3371339, Length: 348

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016947:2380500:242898024289802429288309Mycobacterium intracellulare MOTT-02 chromosome, complete genometransposase5e-30129
NC_009077:3323291:334486833448683345176309Mycobacterium sp. JLS, complete genometransposase IS3/IS911 family protein5e-30129
NC_008705:3377697:339927433992743399582309Mycobacterium sp. KMS, complete genometransposase IS3/IS911 family protein5e-30129
NC_009338:630130:639406639406639714309Mycobacterium gilvum PYR-GCK chromosome, complete genometransposase IS3/IS911 family protein2e-26117
NC_008726:1142500:116052211605221160830309Mycobacterium vanbaalenii PYR-1, complete genometransposase IS3/IS911 family protein8e-26115
NC_008726:6335961:636093363609336361241309Mycobacterium vanbaalenii PYR-1, complete genometransposase IS3/IS911 family protein8e-26115
NC_008596:4152916:416482541648254165133309Mycobacterium smegmatis str. MC2 155, complete genometransposase7e-25112
NC_009338:3359500:338207933820793382387309Mycobacterium gilvum PYR-GCK chromosome, complete genometransposase IS3/IS911 family protein1e-24111
NC_014814:4809607:482276548227654823073309Mycobacterium sp. Spyr1 chromosome, complete genomeTransposase1e-24111
NC_014814:3892000:389660438966043896912309Mycobacterium sp. Spyr1 chromosome, complete genomeTransposase1e-24111
NC_015434:666692:685636685636685944309Verrucosispora maris AB-18-032 chromosome, complete genometransposase IS3/IS911 family protein7e-23105
NC_015434:2460053:248946924894692489777309Verrucosispora maris AB-18-032 chromosome, complete genometransposase IS3/IS911 family protein7e-23105
NC_015859:3126500:313320631332063133445240Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element2e-1994.4
NC_016948:1074034:108061710806171080922306Mycobacterium intracellulare MOTT-64 chromosome, complete genometransposase7e-1992.4
NC_013172:606387:613654613654613962309Brachybacterium faecium DSM 4810, complete genomeTransposase1e-1891.7
NC_008726:6335961:636825863682586368605348Mycobacterium vanbaalenii PYR-1, complete genometransposase IS3/IS911 family protein1e-1582
NC_010612:5626259:563264656326465633002357Mycobacterium marinum M, complete genometransposase3e-1580.5
NC_012803:1094679:110456011045601104853294Micrococcus luteus NCTC 2665, complete genomeTransposase6e-1579.7
NC_014151:4021394:403326040332604033562303Cellulomonas flavigena DSM 20109 chromosome, complete genometransposase IS3/IS911 family protein6e-1579.3
NC_015671:3093596:309880030988003099102303Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein1e-1479
NC_015671:255808:290924290924291226303Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein2e-1478.2
NC_015671:139892:144607144607144909303Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein2e-1478.2
NC_015671:557720:572214572214572516303Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein2e-1478.2
NC_015671:255808:266968266968267270303Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein2e-1478.2
NC_015588:2200517:221247222124722212765294Isoptericola variabilis 225 chromosome, complete genometransposase IS3/IS911 family protein9e-1475.5
NC_006087:345976:375552375552375857306Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase1e-1375.1
NC_006087:2326143:233551023355102335734225Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase2e-1374.7
NC_013235:2257899:227783222778322278119288Nakamurella multipartita DSM 44233, complete genometransposase IS3/IS911 family protein3e-1270.5
NC_013235:682902:692336692336692623288Nakamurella multipartita DSM 44233, complete genometransposase IS3/IS911 family protein3e-1270.5
NC_013235:3129384:313842131384213138708288Nakamurella multipartita DSM 44233, complete genometransposase IS3/IS911 family protein3e-1270.5
NC_014158:233733:308275308275308568294Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase IS3/IS911 family protein4e-1270.1
NC_014158:233733:268332268332268625294Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase IS3/IS911 family protein4e-1270.1
NC_014158:1479313:149859114985911498884294Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase IS3/IS911 family protein4e-1270.1
NC_014158:233733:244120244120244413294Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase IS3/IS911 family protein4e-1270.1
NC_014158:233733:286000286000286293294Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase IS3/IS911 family protein4e-1270.1
NC_013235:4938798:495918349591834959470288Nakamurella multipartita DSM 44233, complete genometransposase IS3/IS911 family protein5e-1269.7
NC_013235:1354443:136274713627471363034288Nakamurella multipartita DSM 44233, complete genometransposase IS3/IS911 family protein2e-1167.8
NC_013169:1845735:186514418651441865449306Kytococcus sedentarius DSM 20547, complete genomeTransposase3e-1167.4
NC_012803:691215:714376714376714663288Micrococcus luteus NCTC 2665, complete genomeTransposase1e-1065.5
NC_015671:1678088:168770916877091687996288Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase IS3/IS911 family protein1e-0961.6
NC_010612:4679594:468062346806234680955333Mycobacterium marinum M, complete genometransposase2e-0961.2
NC_013169:2423863:244096624409662441265300Kytococcus sedentarius DSM 20547, complete genomeTransposase2e-0960.8
NC_013169:1845735:185280518528051853104300Kytococcus sedentarius DSM 20547, complete genomeTransposase4e-0960.1
NC_013169:2423863:243388824338882434187300Kytococcus sedentarius DSM 20547, complete genomeTransposase7e-0959.3
NC_013169:1941410:194616819461681946467300Kytococcus sedentarius DSM 20547, complete genomeTransposase7e-0959.3
NC_010612:5626259:563394556339455634241297Mycobacterium marinum M, complete genometransposase1e-0858.9
NC_014550:3377834:339552133955213395820300Arthrobacter arilaitensis Re117, complete genometransposase of ISAar24, IS3 family, IS3 group, orfA8e-0855.8
NC_016947:1455744:146719614671961467444249Mycobacterium intracellulare MOTT-02 chromosome, complete genometransposase2e-0754.7
NC_008271:140846:152455152455152739285Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprobable transposase2e-0754.3