Pre_GI: BLASTP Hits

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Query: NC_008146:2744612:2760455 Mycobacterium sp. MCS, complete genome

Start: 2760455, End: 2760712, Length: 258

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:2763131:277834327783432778600258Mycobacterium sp. KMS, complete genomeconserved hypothetical protein4e-44176
NC_007925:4060635:407828540782854078545261Rhodopseudomonas palustris BisB18, complete genomehypothetical protein1e-22104
NC_014006:850763:906271906271906546276Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein6e-1889.4
NC_009138:2110500:211165121116512111899249Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-1787.4
NC_007481:3167434:316982631698263170086261Pseudoalteromonas haloplanktis TAC125 chromosome I, completehypothetical protein6e-1785.9
NC_016628:537137:577191577191577439249Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein3e-1683.6
NC_009831:4447919:445523944552394455487249Shewanella sediminis HAW-EB3, complete genomehypothetical protein2e-1374.7
NC_008577:4183361:418879241887924189037246Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein2e-1374.7
NC_008321:3964414:396991939699193970164246Shewanella sp. MR-4, complete genomehypothetical protein2e-1374.7
NC_008750:807446:823481823481823726246Shewanella sp. W3-18-1, complete genomehypothetical protein3e-1373.9
NC_008322:722612:734507734507734752246Shewanella sp. MR-7, complete genomehypothetical protein8e-1372.4
NC_004347:791897:802892802892803137246Shewanella oneidensis MR-1, complete genomehypothetical protein1e-1271.6