Pre_GI: BLASTP Hits

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Query: NC_008146:1748026:1785139 Mycobacterium sp. MCS, complete genome

Start: 1785139, End: 1785636, Length: 498

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009338:555587:591079591079591576498Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-90330
NC_009077:2308634:232742823274282327925498Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit6e-90329
NC_008752:166877:185768185768186256489Acidovorax avenae subsp. citrulli AAC00-1, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit5e-1373.6
NC_015138:201323:215178215178215705528Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completearomatic-ring-hydroxylating dioxygenase subunit beta1e-1168.9
NC_016147:2964178:298013329801332980591459Pseudoxanthomonas spadix BD-a59 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-0961.2
NC_008712:250240:265642265642266136495Arthrobacter aurescens TC1 plasmid TC1, complete sequenceAromatic-ring hydroxylating dioxygenase beta-subunit3e-0960.8
NC_016147:3023180:304000930400093040473465Pseudoxanthomonas spadix BD-a59 chromosome, complete genomesmall subunit aromatic oxygenase8e-0959.7
NC_010170:1580832:158973415897341590213480Bordetella petrii, complete genomehypothetical protein1e-0859.3
NC_007951:3655088:367633636763363676815480Burkholderia xenovorans LB400 chromosome 1, complete sequenceAromatic-ring-hydroxylating dioxygenase, beta subunit1e-0859.3
NC_007951:3655088:366945236694523669982531Burkholderia xenovorans LB400 chromosome 1, complete sequenceOrtho-halobenzoate-1,2-dioxygenase, beta subunit1e-0859.3
NC_014641:20103:439634396344493531Achromobacter xylosoxidans A8 plasmid pA81, complete sequencering hydroxylating beta subunit family protein 61e-0859.3
NC_008781:2611702:262452426245242625009486Polaromonas naphthalenivorans CJ2, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit6e-0857
NC_015727:1294532:132246413224641322982519Cupriavidus necator N-1 plasmid BB1p, complete sequencedioxygenase small subunit1e-0755.8
NC_011666:1572487:158948515894851589961477Methylocella silvestris BL2, complete genomearomatic-ring-hydroxylating dioxygenase beta subunit2e-0754.7
NC_016585:1004000:101710510171051017578474Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceputative aromatic-ring-hydroxylating dioxygenase, beta subunit6e-0753.5
NC_013446:1648556:169079216907921691256465Comamonas testosteroni CNB-2, complete genomeoxygenase small subunit of terephthalate 1,2-dioxygenase1e-0549.3