Pre_GI: BLASTP Hits

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Query: NC_008146:1577604:1603281 Mycobacterium sp. MCS, complete genome

Start: 1603281, End: 1604132, Length: 852

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:1557711:160893816089381609789852Mycobacterium sp. KMS, complete genomeTIR protein3e-164577
NC_008269:1067082:107380010738001074579780Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencehypothetical protein5e-64244
NC_008740:1414926:142406314240631424830768Marinobacter aquaeolei VT8, complete genomeTIR protein2e-62239
NC_012441:264795:278349278349279176828Brucella melitensis ATCC 23457 chromosome I, complete sequencehypothetical protein4e-38158
NC_003317:1719546:172407717240771724829753Brucella melitensis 16M chromosome I, complete sequencehypothetical protein5e-38158
NC_017244:264921:278343278343279005663Brucella melitensis M28 chromosome chromosome 1, complete sequencehypothetical protein1e-37157
NC_017246:264917:278338278338279000663Brucella melitensis M5-90 chromosome chromosome I, completehypothetical protein1e-37157
NC_006932:266000:279593279593280345753Brucella abortus biovar 1 str. 9-941 chromosome I, completehypothetical protein8e-38157
NC_007618:262415:275959275959276711753Brucella melitensis biovar Abortus 2308 chromosome I, completehypothetical protein8e-38157
NC_010742:264433:277977277977278804828Brucella abortus S19 chromosome 1, complete sequencehypothetical protein6e-38157
NC_016795:9384:140051400514667663Brucella abortus A13334 chromosome 1, complete sequencehypothetical protein2e-37156
NC_015857:265721:279340279340280002663Brucella pinnipedialis B2/94 chromosome chromosome 1, completehypothetical protein2e-37156
NC_010169:261473:275030275030275857828Brucella suis ATCC 23445 chromosome I, complete sequenceTIR4e-37155
NC_009505:264963:278417278417279244828Brucella ovis ATCC 25840 chromosome I, complete sequencehypothetical protein3e-37155
NC_016831:947281:977164977164978045882Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein8e-33140
NC_011294:2053991:206527220652722066153882Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein8e-33140
NC_011274:2044000:205649520564952057376882Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-33140
NC_011205:2180598:219228921922892193170882Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853TIR protein8e-33140
NC_008686:95326:105698105698106597900Paracoccus denitrificans PD1222 chromosome 1, complete sequenceTIR protein3e-31135
NC_008253:1938975:195597819559781956841864Escherichia coli 536, complete genomehypothetical protein8e-31134
NC_004431:2185750:220276322027632203686924Escherichia coli CFT073, complete genomehypothetical protein8e-31134
NC_010175:3287500:3290905329090532926411737Chloroflexus aurantiacus J-10-fl, complete genomeTIR protein3e-23108
NC_012032:3281869:3285922328592232876581737Chloroflexus sp. Y-400-fl, complete genomeTIR protein3e-23108
NC_015508:296856:308690308690309379690Agrobacterium sp. H13-3 chromosome linear, complete sequencehypothetical protein3e-1479.3
NC_013158:768000:784289784289785086798Halorhabdus utahensis DSM 12940, complete genomeTIR protein7e-1477.8
NC_010465:3431500:343325034332503433945696Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein3e-1375.9
NC_017248:264847:278786278786279388603Brucella melitensis NI chromosome chromosome I, complete sequencehypothetical protein6e-1271.6
NC_007494:621673:635584635584635979396Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencehypothetical protein3e-1169.3
NC_017955:3731480:385094838509483851739792Modestobacter marinus, complete genomehypothetical protein6e-1064.7
NC_002939:2844240:2857020285702028583301311Geobacter sulfurreducens PCA, complete genomehypothetical protein4e-0962.4
NC_017955:1667500:167758316775831678083501Modestobacter marinus, complete genomehypothetical protein1e-0860.8
NC_009663:2184594:2201553220155322038712319Sulfurovum sp. NBC37-1, complete genomehypothetical protein1e-0860.8
NC_015216:1102837:111373211137321114694963Methanobacterium sp. AL-21 chromosome, complete genomeTiR protein2e-0859.7
NC_014394:1626699:163004216300421630818777Gallionella capsiferriformans ES-2 chromosome, complete genomeTIR protein2e-0756.6
NC_010338:4108280:4124317412431741254411125Caulobacter sp. K31, complete genomeTIR protein5e-0755.5
NC_014355:243543:255396255396255974579Candidatus Nitrospira defluvii, complete genomehypothetical protein3e-0652.8
NC_019940:203718:213876213876214661786Thioflavicoccus mobilis 8321 chromosome, complete genomeTIR domain-containing protein5e-0651.6