Pre_GI: BLASTP Hits

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Query: NC_008146:1577604:1578581 Mycobacterium sp. MCS, complete genome

Start: 1578581, End: 1578922, Length: 342

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:1557711:158301815830181583230213Mycobacterium sp. KMS, complete genomeHeavy metal transport/detoxification protein2e-33140
NC_009077:4774499:477779347777934778005213Mycobacterium sp. JLS, complete genomeHeavy metal transport/detoxification protein8e-24108
NC_014814:5422972:544359654435965443808213Mycobacterium sp. Spyr1 chromosome, complete genomecopper chaperone3e-22103
NC_014814:3364336:336649033664903366708219Mycobacterium sp. Spyr1 chromosome, complete genomecopper chaperone4e-2096.7
NC_013169:1058463:108516010851601085369210Kytococcus sedentarius DSM 20547, complete genomecopper chaperone1e-1892
NC_007164:622000:624970624970625188219Corynebacterium jeikeium K411, complete genomehypothetical protein1e-1272
NC_013947:6221877:624238362423836242592210Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeHeavy metal transport/detoxification protein6e-1166.2
NC_013441:2761459:278178027817802781986207Gordonia bronchialis DSM 43247, complete genomeHeavy metal transport/detoxification protein1e-1065.5
NC_006958:3240019:325648832564883256694207Corynebacterium glutamicum ATCC 13032, complete genomeCopper chaperone2e-1064.7
NC_003450:3266604:328318132831813283387207Corynebacterium glutamicum ATCC 13032, complete genomeputative metal associated protein2e-1064.7
NC_004369:2968251:299574929957492995958210Corynebacterium efficiens YS-314, complete genomehypothetical protein3e-1063.9
NC_003450:3266604:328868632886863288889204Corynebacterium glutamicum ATCC 13032, complete genomeputative copper chaperone3e-1063.9
NC_003155:6444500:646298364629836463222240Streptomyces avermitilis MA-4680, complete genomecopper chaperone3e-0960.5
NC_017955:1584269:159551915955191595779261Modestobacter marinus, complete genomeCopper chaperone3e-0960.5
NC_013929:6526745:654392265439226544161240Streptomyces scabiei 87.22 chromosome, complete genomemetal-binding protein1e-0755.1
NC_013939:295220:3054223054223078812460Deferribacter desulfuricans SSM1, complete genomeheavy-metal transporting P-type ATPase3e-0753.9
NC_014151:4021394:405341440534144053638225Cellulomonas flavigena DSM 20109 chromosome, complete genomeHeavy metal transport/detoxification protein4e-0753.5
NC_007907:5104476:511809451180945118309216Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-0753.1
NC_013939:295220:307900307900308130231Deferribacter desulfuricans SSM1, complete genomeheavy metal binding protein6e-0752.8
NC_014815:4491413:449456244945624494846285Micromonospora sp. L5 chromosome, complete genomeheavy metal transport/detoxification protein1e-0652
NC_014388:55903:6044460444629902547Butyrivibrio proteoclasticus B316 chromosome 2, complete genomeheavy metal translocating P-type ATPase1e-0651.6
NC_017986:1862408:187755018775501877825276Pseudomonas putida ND6 chromosome, complete genomeMerP protein3e-0650.4
NC_016109:8256000:826751082675108267725216Kitasatospora setae KM-6054, complete genomeputative metal-binding protein4e-0650.1
NC_009342:135500:144249144249144581333Corynebacterium glutamicum R chromosome, complete genomehypothetical protein5e-0649.7
NC_017068:1852708:1852708185270818552722565Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative copper-exporting P-type ATPase A6e-0649.7
NC_009253:2315958:233815323381532338353201Desulfotomaculum reducens MI-1 chromosome, complete genomeheavy metal transport/detoxification protein6e-0649.3
NC_016943:1810417:182129618212961821514219Blastococcus saxobsidens DD2, complete genomeheavy metal transport/detoxification protein7e-0649.3