Pre_GI: BLASTP Hits

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Query: NC_008146:1535827:1560844 Mycobacterium sp. MCS, complete genome

Start: 1560844, End: 1561617, Length: 774

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:1557711:156515215651521565925774Mycobacterium sp. KMS, complete genomehelix-turn-helix- domain containing protein, AraC type7e-144509
NC_009077:4774499:477944847794484780218771Mycobacterium sp. JLS, complete genomehelix-turn-helix- domain containing protein, AraC type1e-93342
NC_008726:3915979:391597939159793916842864Mycobacterium vanbaalenii PYR-1, complete genomehelix-turn-helix- domain containing protein, AraC type3e-84311
NC_009338:2925286:295287329528732953646774Mycobacterium gilvum PYR-GCK chromosome, complete genomehelix-turn-helix domain-containing protein4e-27121
NC_008347:2515921:252733125273312528032702Maricaulis maris MCS10, complete genometranscriptional regulator, AraC family6e-22104
NC_015856:3832000:385194538519453852712768Collimonas fungivorans Ter331 chromosome, complete genomeAraC family transcriptional regulator2e-1789.7
NC_018080:3088866:311256031125603113294735Pseudomonas aeruginosa DK2 chromosome, complete genomearac family transcriptional regulator7e-1684.3
NC_020126:7372685:738417473841747385061888Myxococcus stipitatus DSM 14675, complete genomeAraC family transcriptional regulator7e-1581.3
NC_010087:460591:460591460591461454864Burkholderia multivorans ATCC 17616 chromosome 3, completetranscriptional regulator, AraC family2e-1376.6
NC_007973:1889076:188991518899151890772858Ralstonia metallidurans CH34 chromosome 1, complete sequencetranscriptional regulator, AraC family2e-1376.3
NC_011145:4365730:437353943735394374387849Anaeromyxobacter sp. K, complete genometranscriptional regulator, AraC family2e-1272.8
NC_010520:3674883:368285236828523683637786Clostridium botulinum A3 str. Loch Maree, complete genomeAraC-family transcriptional regulator8e-1167.4
NC_016609:6022778:603086160308616031598738Niastella koreensis GR20-10 chromosome, complete genomeHelix-turn-helix, AraC domain-containing protein2e-1066.6
NC_013165:1780321:179447417944741795223750Slackia heliotrinireducens DSM 20476, complete genometranscriptional regulator, AraC family4e-0962
NC_006361:1720031:173631817363181737109792Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator2e-0860.1
NC_013131:9711508:973286397328639733684822Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, AraC family9e-0857.4
NC_014541:3927500:394162039416203942606987Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, AraC family with amidase-like domain5e-0651.6