Pre_GI: BLASTP Hits

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Query: NC_008146:1016446:1022408 Mycobacterium sp. MCS, complete genome

Start: 1022408, End: 1023400, Length: 993

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:1022252:102821410282141029206993Mycobacterium sp. KMS, complete genomeEndonuclease/exonuclease/phosphatase5e-176617
NC_008726:1776192:178114017811401782135996Mycobacterium vanbaalenii PYR-1, complete genomeEndonuclease/exonuclease/phosphatase4e-78291
NC_016604:1285277:129051912905191291514996Mycobacterium rhodesiae NBB3 chromosome, complete genomemetal-dependent hydrolase2e-56219
NC_019673:359540:375554375554376519966Saccharothrix espanaensis DSM 44229 complete genomeEndonuclease/exonuclease/phosphatase3e-27122
NC_014158:1566310:156939515693951570333939Tsukamurella paurometabola DSM 20162 chromosome, complete genomeEndonuclease/exonuclease/phosphatase4e-26119
NC_013595:8603188:861129686112968612237942Streptosporangium roseum DSM 43021, complete genomeMetal-dependent hydrolase-like protein2e-23110
NC_013947:1011899:101682110168211017804984Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeEndonuclease/exonuclease/phosphatase5e-22105
NC_018720:627642:6471796471796483451167Bifidobacterium asteroides PRL2011 chromosome, complete genomeendonuclease/exonuclease/phosphatase9e-21101
NC_010572:188500:2059712059712070021032Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein7e-1685.1
NC_014644:1363445:1363445136344513645151071Gardnerella vaginalis ATCC 14019 chromosome, complete genomeendonuclease/exonuclease/phosphatase3e-1582.8
NC_018720:417500:436611436611437573963Bifidobacterium asteroides PRL2011 chromosome, complete genomeendonuclease/exonuclease/phosphatase family protein1e-1377.4
NC_008618:1729739:1751431175143117526241194Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein7e-1374.7
NC_016109:116995:134493134493135431939Kitasatospora setae KM-6054, complete genomehypothetical protein1e-1170.9
NC_013595:5282207:5283682528368252847581077Streptosporangium roseum DSM 43021, complete genomehypothetical protein4e-0962.4
NC_021177:2766910:2784610278461027856291020Streptomyces fulvissimus DSM 40593, complete genomeMembrane protein2e-0653.9