Pre_GI: BLASTP Hits

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Query: NC_008044:1736000:1757916 Silicibacter sp. TM1040, complete genome

Start: 1757916, End: 1762442, Length: 4527

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008044:857759:8595818595818639364356Silicibacter sp. TM1040, complete genomeTape measure domain01363
NC_007493:628243:6518236518236568445022Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencePotential phage tail tape measure protein5e-31137
NC_011963:325806:3466693466693515674899Rhodobacter sphaeroides KD131 chromosome 1, complete sequencehypothetical protein1e-29133
NC_007494:867901:8945928945928997665175Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencehypothetical protein1e-28130
NC_011958:923789:9471909471909523645175Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein2e-28129
NC_011963:3073283:3092788309278830969454158Rhodobacter sphaeroides KD131 chromosome 1, complete sequencePotential phage tail tape measure protein4e-25118
NC_007493:207932:2296552296552346615007Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencephage-related protein, probable phage tail tape meausure protein, lambda family3e-24115
NC_010645:1523867:1525196152519615307455550Bordetella avium 197N, complete genomephage tail tape measure protein1e-1689.7