Pre_GI: BLASTP Hits

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Query: NC_008044:136844:153323 Silicibacter sp. TM1040, complete genome

Start: 153323, End: 153679, Length: 357

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome5e-1579.7
NC_004193:375416:653117653117653473357Oceanobacillus iheyensis HTE831, complete genomenegative regulator of sigma-B activity1e-1374.7
NC_019896:3491000:352026835202683520633366Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeAntagonist protein RsbS2e-1373.9
NC_014924:2517068:252267025226702523035366Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeSulfate transporter/antisigma-factor antagonist STAS2e-1271.2
NC_019673:6394319:645117164511716451536366Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1271.2
NC_010424:697187:728121728121728483363Candidatus Desulforudis audaxviator MP104C, complete genomeanti-sigma-factor antagonist2e-1270.9
NC_018704:347948:349625349625349981357Amphibacillus xylanus NBRC 15112, complete genomeantagonist protein RsbS6e-1269.3
NC_010505:5525461:555075755507575551158402Methylobacterium radiotolerans JCM 2831, complete genomeanti-sigma-factor antagonist8e-1165.9
NC_015957:690817:707744707744708154411Streptomyces violaceusniger Tu 4113 chromosome, complete genomeanti-sigma-factor antagonist1e-1065.1