Pre_GI: BLASTP Hits

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Query: NC_008044:136844:152275 Silicibacter sp. TM1040, complete genome

Start: 152275, End: 152919, Length: 645

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017191:467207:468769468769469371603Bacillus amyloliquefaciens XH7 chromosome, complete genomeserine phosphatase1e-1169.7
NC_017190:466236:467472467472468074603Bacillus amyloliquefaciens LL3 chromosome, complete genomeserine phosphatase1e-1169.7
NC_017188:461177:462739462739463341603Bacillus amyloliquefaciens TA208 chromosome, complete genomeserine phosphatase1e-1169.7
NC_014551:483773:485335485335485937603Bacillus amyloliquefaciens DSM 7, complete genomeserine phosphatase1e-1169.7
NC_020410:495184:496746496746497348603Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeserine phosphatase8e-1167
NC_019842:484933:486169486169486771603Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,negative regulator of sigma-B (phosphoserine phosphatase)8e-1167
NC_010505:5525461:555154655515465552541996Methylobacterium radiotolerans JCM 2831, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase6e-1063.9
NC_017195:517344:517344517344517943600Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completephosphoserine phosphatase RsbX9e-1063.5
NC_020244:516993:516993516993517592600Bacillus subtilis XF-1, complete genomeserine phosphatase1e-0963.2
NC_016047:637778:640409640409641008600Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completephosphoserine phosphatase RsbX1e-0963.2
NC_009725:496443:498005498005498607603Bacillus amyloliquefaciens FZB42, complete genomeRsbX2e-0962.8
NC_014219:567033:569706569706570317612Bacillus selenitireducens MLS10 chromosome, complete genomeStage II sporulation E family protein2e-0962.8
NC_014479:509919:511481511481512080600Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeserine phosphatase1e-0962.8
NC_000964:521975:523211523211523810600Bacillus subtilis subsp. subtilis str. 168, complete genomeserine phosphatase2e-0962
NC_014976:2735423:273805427380542738653600Bacillus subtilis BSn5 chromosome, complete genomeserine phosphatase2e-0962
NC_019896:3491000:351662235166223517221600Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completePhosphoserine phosphatase RsbX2e-0962
NC_018704:347948:353040353040353633594Amphibacillus xylanus NBRC 15112, complete genomephosphoserine phosphatase RsbX3e-0962
NC_004193:375416:656608656608657204597Oceanobacillus iheyensis HTE831, complete genomeindirect negative regulator of sigma-B activity4e-0961.2
NC_019673:6394319:6452007645200764530321026Saccharothrix espanaensis DSM 44229 complete genomeAnti-sigma regulatory factor, serine/threonine protein kinase3e-0858.5
NC_006582:883922:886993886993887619627Bacillus clausii KSM-K16, complete genomeindirect negative regulator of sigma-B activity2e-0755.5
NC_020126:3979792:398714239871423987711570Myxococcus stipitatus DSM 14675, complete genomehypothetical protein4e-0651.6