Pre_GI: BLASTP Hits

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Query: NC_008043:86470:105191 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 105191, End: 106237, Length: 1047

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007963:317291:3172913172913183551065Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctP subunit8e-71267
NC_007969:1076287:1077587107758710786391053Psychrobacter cryohalolentis K5, complete genomeTRAP dicarboxylate transporter- DctP subunit3e-48192
NC_016629:3789554:3828241382824138292871047Desulfovibrio africanus str. Walvis Bay chromosome, completeextracellular solute-binding protein7e-32138
NC_015573:813000:8433328433328443841053Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomefamily 7 extracellular solute-binding protein5e-2099
NC_008596:3404832:3424110342411034252101101Mycobacterium smegmatis str. MC2 155, complete genomebacterial extracellular solute-binding protein, family protein 71e-1997.4
NC_019978:2532640:2546495254649525475501056Halobacteroides halobius DSM 5150, complete genometripartite ATP-independent periplasmic transporter solute receptor, DctP family5e-1892.4
NC_007503:1111457:1159123115912311601901068Carboxydothermus hydrogenoformans Z-2901, complete genomeTRAP dicarboxylate transporter, DctP subunit3e-1686.3
NC_016943:4194002:4236501423650142375921092Blastococcus saxobsidens DD2, complete genomeTRAP dicarboxylate transporter subunit DctP8e-1581.6
NC_015519:1888917:1890773189077318917981026Tepidanaerobacter sp. Re1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP9e-1478.2
NC_011892:352652:365576365576366562987Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeTRAP dicarboxylate transporter, DctP subunit3e-1272.8
NC_020911:3046916:306024730602473061245999Octadecabacter antarcticus 307, complete genomeTRAP transporter periplasmatic solute-binding protein DctP5e-1272.4
NC_016048:3856665:3866163386616338672241062Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter8e-1271.6
NC_014166:1179335:1189541118954111905541014Arcobacter nitrofigilis DSM 7299 chromosome, complete genomefamily 7 extracellular solute-binding protein8e-1271.6
NC_011661:1807101:180894618089461809941996Dictyoglomus turgidum DSM 6724, complete genomeTRAP dicarboxylate transporter- DctP subunit8e-1271.6
NC_016593:762216:7896097896097906491041Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeTRAP dicarboxylate transporter subunit DctP1e-1170.9
NC_017187:325229:340255340255341247993Arcobacter butzleri ED-1, complete genomeC4-dicarboxylate-binding periplasmic protein1e-1170.9
NC_014966:1668822:169116016911601692143984Vibrio vulnificus MO6-24/O chromosome II, complete sequenceTRAP-type C4-dicarboxylate transporter periplasmic protein4e-1169.3
NC_014532:2268078:2268078226807822692171140Halomonas elongata DSM 2581, complete genomeTRAP transporter substrate-binding protein7e-1168.6
NC_014041:3197192:320316532031653204151987Zunongwangia profunda SM-A87 chromosome, complete genomeputative dicarboxylate-binding periplasmic protein9e-1168.2
NC_012491:1293086:1294546129454612955951050Brevibacillus brevis NBRC 100599, complete genomeprobable C4-dicarboxylate ABC transporter substrate binding protein8e-1168.2
NC_020210:661236:671267671267672223957Geobacillus sp. GHH01, complete genome2,3-diketo-L-gulonate-binding periplasmic protein8e-1168.2
NC_015259:485015:5590315590315600831053Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative solute-binding periplasmic protein1e-1067.8
NC_010634:1916000:195309619530961954088993Yersinia pseudotuberculosis PB1/+, complete genomeTRAP dicarboxylate transporter, DctP subunit1e-1067.8
NC_006155:1916426:195311219531121954104993Yersinia pseudotuberculosis IP 32953, complete genomeTRAP-T family C4-dicarboxylate transporter, periplasmic binding protein (DctP subunit)1e-1067.8
NC_009439:4404942:4427124442712444281251002Pseudomonas mendocina ymp, complete genomeTRAP dicarboxylate transporter, DctP subunit1e-1067.4
NC_015224:1914833:192134819213481922325978Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative C4-dicarboxylate transporter,periplasmic protein4e-1065.9
NC_010506:2146444:2155767215576721568461080Shewanella woodyi ATCC 51908, complete genomeTRAP dicarboxylate transporter- DctP subunit1e-0964.7
NC_007644:416000:4256164256164266231008Moorella thermoacetica ATCC 39073, complete genomeTRAP dicarboxylate transporter, DctP subunit1e-0964.3
NC_004193:3530000:3539179353917935402011023Oceanobacillus iheyensis HTE831, complete genomeC4-dicarboxylate transport system C4-dicarboxylate-binding protein1e-0963.9
NC_005296:2860000:2883903288390328849221020Rhodopseudomonas palustris CGA009, complete genomeTrapT family, dctP subunit, C4-dicarboxylate periplasmic binding protein2e-0963.5
NC_007778:3784104:380823938082393809237999Rhodopseudomonas palustris HaA2, complete genomeTRAP dicarboxylate transporter DctP subunit3e-0963.2
NC_014011:1354261:1371285137128513723221038Aminobacterium colombiense DSM 12261 chromosome, complete genomeExtracellular solute-binding protein, family 73e-0963.2
NC_015565:1511426:1528392152839215294141023Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeTRAP dicarboxylate transporter subunit DctP3e-0962.8
NC_009778:4188000:422889942288994229882984Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-0962
NC_015914:2230076:225379622537962254788993Cyclobacterium marinum DSM 745 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP1e-0861.2
NC_006582:4256915:425691542569154257904990Bacillus clausii KSM-K16, complete genomeC4-dicarboxylate transport system substrate-binding protein2e-0860.5
NC_015573:162000:1721951721951732321038Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP2e-0860.1
NC_016943:4194002:4201214420121442022901077Blastococcus saxobsidens DD2, complete genomeTRAP-type C4-dicarboxylate transport system, Extracellular solute-binding protein2e-0860.1
NC_007963:2777066:2785741278574127867511011Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter, DctP subunit4e-0859.3
NC_006569:370846:3762033762033772221020Silicibacter pomeroyi DSS-3 megaplasmid, complete sequenceTRAP dicarboxylate family transporter, DctP subunit1e-0758.2
NC_007645:3688000:3688251368825136892671017Hahella chejuensis KCTC 2396, complete genomeTRAP-type mannitol/chloroaromatic compound transport system, periplasmic component9e-0858.2
NC_020911:18500:362213622137201981Octadecabacter antarcticus 307, complete genomeTRAP transporter periplasmatic solute-binding protein DctP1e-0757.4
NC_016048:308342:3402363402363412941059Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter2e-0757.4
NC_014206:1618988:1621954162195416230121059Geobacillus sp. C56-T3 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP2e-0757.4
NC_014532:2989185:300087330008733001859987Halomonas elongata DSM 2581, complete genomeTRAP transporter substrate-binding protein3e-0756.6
NC_009997:3483157:3500296350029635013151020Shewanella baltica OS195, complete genomeTRAP dicarboxylate transporter, DctP subunit2e-0756.6
NC_016901:3430401:3447508344750834485271020Shewanella baltica OS678 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP2e-0756.6
NC_015458:1692401:169891516989151699898984Pusillimonas sp. T7-7 chromosome, complete genomeTRAP dicarboxylate transporter, DctP subunit2e-0756.6
NC_014011:472650:4898554898554909221068Aminobacterium colombiense DSM 12261 chromosome, complete genomeExtracellular solute-binding protein, family 73e-0756.2
NC_009654:304000:3190013190013200141014Marinomonas sp. MWYL1, complete genomeTRAP dicarboxylate transporter- DctP subunit3e-0756.2
NC_008254:3143770:3155453315545331565411089Mesorhizobium sp. BNC1, complete genomeTRAP dicarboxylate transporter- DctP subunit7e-0755.1
NC_006510:1995916:2015861201586120168891029Geobacillus kaustophilus HTA426, complete genomeC4-dicarboxylate transport system (C4-dicarboxylate-binding protein)8e-0755.1
NC_016513:1761830:176842317684231769415993Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDctP protein4e-0652.8