Pre_GI: BLASTP Hits

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Query: NC_008043:499399:522127 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 522127, End: 523041, Length: 915

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020911:3046916:306664830666483067562915Octadecabacter antarcticus 307, complete genome2-dehydro-3-deoxygalactonokinase6e-32137
NC_011740:3739395:3738476373847637394801005Escherichia fergusonii ATCC 35469, complete genomeacidic carbohydrate kinase3e-26119
NC_015061:2927707:293093229309322931828897Rahnella sp. Y9602 chromosome, complete genome2-dehydro-3-deoxygalactonokinase3e-24112
NC_017047:2957957:296118129611812962077897Rahnella aquatilis HX2 chromosome, complete genome2-oxo-3-deoxygalactonate kinase8e-24111
NC_014550:3534000:354943835494383550430993Arthrobacter arilaitensis Re117, complete genome2-dehydro-3-deoxygalactonokinase1e-22107
NC_007908:1010162:101252710125271013417891Rhodoferax ferrireducens T118, complete genome2-dehydro-3-deoxygalactonokinase2e-1893.2
NC_014006:611592:610663610663611595933Sphingobium japonicum UT26S chromosome 1, complete genome2-dehydro-3-deoxygalactonokinase9e-1787.8
NC_010498:1094000:111235911123591113237879Escherichia coli SMS-3-5, complete genome2-dehydro-3-deoxygalactonokinase2e-1686.7
NC_004337:3590323:387828238782823879160879Shigella flexneri 2a str. 301, complete genome2-oxo-3-deoxygalactonate kinase1e-1583.6