Pre_GI: BLASTP Hits

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Query: NC_008043:499399:511757 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 511757, End: 512116, Length: 360

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008044:136844:150726150726151112387Silicibacter sp. TM1040, complete genomeresponse regulator receiver protein2e-42170
NC_008044:857759:870157870157870582426Silicibacter sp. TM1040, complete genomeresponse regulator receiver protein3e-1063.9
NC_013730:2403930:240692224069222407329408Spirosoma linguale DSM 74, complete genomeresponse regulator receiver protein3e-0960.5
NC_015638:3113253:311681731168173117257441Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeresponse regulator receiver6e-0856.2
NC_013222:817686:854156854156854554399Robiginitalea biformata HTCC2501, complete genomeresponse regulator3e-0753.9
NC_015177:2972701:298715929871592987551393Pedobacter saltans DSM 12145 chromosome, complete genomeresponse regulator receiver5e-0753.1
NC_001264:28266:534665346653915450Deinococcus radiodurans R1 chromosome 2, complete sequenceresponse regulator3e-0650.4