Pre_GI: BLASTP Hits

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Query: NC_007953:938346:952956 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 952956, End: 953753, Length: 798

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008542:197500:197615197615198499885Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceamidohydrolase 23e-29129
NC_020302:146807:156034156034156915882Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein2e-1893.2
NC_003106:1809137:182269018226901823433744Sulfolobus tokodaii str. 7, complete genomehypothetical protein4e-1788.6
NC_012623:2369671:239175823917582392567810Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeamidohydrolase 24e-1788.6
NC_007907:456164:476637476637477575939Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1583.6
NC_015125:2288487:231063723106372311539903Microbacterium testaceum StLB037, complete genomepredicted metal-dependent hydrolase of the TIM-barrel fold2e-1479.7
NC_015733:2658337:269726426972642697797534Pseudomonas putida S16 chromosome, complete genomeamidohydrolase 22e-1479.7
NC_015563:4206112:421638942163894217222834Delftia sp. Cs1-4 chromosome, complete genomeamidohydrolase 24e-1168.6
NC_010511:4258000:429704542970454297896852Methylobacterium sp. 4-46 chromosome, complete genomeamidohydrolase 26e-1168.2
NC_009953:3224412:324058332405833241395813Salinispora arenicola CNS-205 chromosome, complete genomeamidohydrolase 23e-1065.9
NC_020126:6190662:619523261952326196041810Myxococcus stipitatus DSM 14675, complete genomeamidohydrolase 23e-0962.4
NC_013739:2106662:213442821344282135279852Conexibacter woesei DSM 14684, complete genomeamidohydrolase 24e-0962
NC_017026:3894000:390775939077593908595837Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein1e-0860.5
NC_009525:3933567:394791239479123948748837Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein1e-0860.5
NC_011892:77975:100135100135100998864Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeamidohydrolase 21e-0757