Pre_GI: BLASTP Hits

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Query: NC_007953:572926:602545 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 602545, End: 603042, Length: 498

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007298:2947200:296361629636162964056441Dechloromonas aromatica RCB, complete genomeHemerythrin HHE cation binding region6e-39159
NC_011662:2320100:235453223545322354975444Thauera sp. MZ1T, complete genomehemerythrin-like metal-binding protein2e-36151
NC_007951:1042291:104346810434681043968501Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein1e-35148
NC_009255:1071868:108949910894991089975477Burkholderia vietnamiensis G4 chromosome 2, complete sequencehemerythrin-like metal-binding protein2e-35148
NC_010086:1907959:192641319264131926889477Burkholderia multivorans ATCC 17616 chromosome 2, completehemerythrin-like metal-binding protein2e-35148
NC_013446:1648556:167576916757691676263495Comamonas testosteroni CNB-2, complete genomehemerythrin-like metal-binding protein1e-33141
NC_007298:1418500:145040314504031450888486Dechloromonas aromatica RCB, complete genomeHemerythrin HHE cation binding region2e-31134
NC_010805:530876:548511548511548891381Burkholderia multivorans ATCC 17616 chromosome 2, completehemerythrin2e-30131
NC_014118:987889:997954997954998499546Burkholderia sp. CCGE1002 chromosome chromosome 2, completehemerythrin-like metal-binding protein1e-29129
NC_012856:798922:823540823540823956417Ralstonia pickettii 12D chromosome 1, complete genomehemerythrin-like metal-binding protein8e-1476.3
NC_013959:826868:864884864884865279396Sideroxydans lithotrophicus ES-1 chromosome, complete genomehemerythrin-like metal-binding protein9e-1372.8
NC_015499:1640500:165795216579521658362411Thermodesulfobium narugense DSM 14796 chromosome, complete genomehemerythrin-like metal-binding protein9e-1166.2
NC_019970:2190695:220829822082982208726429Thermoanaerobacterium thermosaccharolyticum M0795, complete genomehemerythrin-like metal-binding domain-containing protein7e-1063.2
NC_014410:2149886:216449021644902164897408Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,hemerythrin-like protein metal-binding protein1e-0962.4
NC_015555:693461:699728699728700135408Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehemerythrin-like metal-binding protein2e-0961.6
NC_014973:1336500:135394313539431354362420Geobacter sp. M18 chromosome, complete genomehemerythrin-like metal-binding protein2e-0858.5
NC_011832:1122268:112609111260911126498408Candidatus Methanosphaerula palustris E1-9c, complete genomehemerythrin-like metal-binding protein3e-0858.2
NC_011146:1429836:144830314483031448725423Geobacter bemidjiensis Bem, complete genomehemerythrin-like metal-binding protein5e-0857
NC_007519:2773000:2799295279929528014632169Desulfovibrio alaskensis G20 chromosome, complete genomemethyl-accepting chemotaxis sensory transducer8e-0856.2
NC_012796:4693500:470948747094874709954468Desulfovibrio magneticus RS-1, complete genomehemerythrin family protein2e-0755.1
NC_012918:1697860:172382617238261724263438Geobacter sp. M21 chromosome, complete genomehemerythrin-like metal-binding protein1e-0652.8
NC_012918:2277500:229754722975472297951405Geobacter sp. M21 chromosome, complete genomehemerythrin-like metal-binding protein1e-0652.4