Pre_GI: BLASTP Hits

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Query: NC_007953:504939:513681 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 513681, End: 514931, Length: 1251

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014974:1076565:1094174109417410953641191Thermus scotoductus SA-01 chromosome, complete genomeextracellular ligand-binding receptor2e-23110
NC_011892:306437:3064373064373076721236Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeExtracellular ligand-binding receptor1e-1894.7
NC_015727:1294532:1319872131987213210951224Cupriavidus necator N-1 plasmid BB1p, complete sequenceABC transporter substrate-binding protein2e-1584.3
NC_015458:3077804:3097937309793730991391203Pusillimonas sp. T7-7 chromosome, complete genomeextracellular ligand-binding receptor2e-1584
NC_014831:2133060:2141827214182721430561230Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family4e-1582.8
NC_010511:637214:6536716536716549121242Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor2e-1377
NC_020210:2044944:2053712205371220549561245Geobacillus sp. GHH01, complete genomeputative leucine ABC transporter substrate-binding protein4e-1376.3
NC_015724:129331:1474211474211486171197Cupriavidus necator N-1 plasmid BB2p, complete sequencebranched-chain amino acid ABC transport system permease protein8e-1375.1
NC_014834:2264108:2301627230162723029791353Rhodopseudomonas palustris DX-1 chromosome, complete genomeextracellular ligand-binding receptor2e-1170.9
NC_009720:464078:4676714676714690081338Xanthobacter autotrophicus Py2, complete genomeextracellular ligand-binding receptor2e-1170.9
NC_006361:5546232:5555078555507855563521275Nocardia farcinica IFM 10152, complete genomehypothetical protein5e-1169.3
NC_008786:1507139:1526660152666015278381179Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor1e-1067.8
NC_009937:5033152:5040446504044650416151170Azorhizobium caulinodans ORS 571, complete genomeputative substrate-binding protein2e-1067
NC_006396:320853:3254713254713268411371Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceleucine-binding protein3e-1066.6
NC_010170:1219641:1241603124160312428051203Bordetella petrii, complete genomeputative Substrate-binding periplasmic protein1e-0964.7
NC_014355:220002:2318072318072330091203Candidatus Nitrospira defluvii, complete genomeputative ABC transporter Leu/Ile/Val-binding protein2e-0963.9
NC_010170:4739925:4743625474362547448961272Bordetella petrii, complete genomeABC transporter substrate-binding protein8e-0962
NC_011004:4073916:4114946411494641162981353Rhodopseudomonas palustris TIE-1, complete genomebranched-chain amino acid ABC transporter, periplasmic binding protein, putative2e-0860.8
NC_017249:908500:9461479461479473311185Bradyrhizobium japonicum USDA 6, complete genomeABC transporter substrate-binding protein3e-0860.5
NC_009483:2489000:2489003248900324901421140Geobacter uraniireducens Rf4 chromosome, complete genomeextracellular ligand-binding receptor3e-0859.7
NC_007626:2204767:2207397220739722086501254Magnetospirillum magneticum AMB-1, complete genomeABC-type branched-chain amino acid transport systems2e-0757
NC_016585:1004000:1019348101934810205441197Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencebranched chain amino acid ABC transporter substrate-binding protein4e-0756.6
NC_015312:6357469:6360162636016263612321071Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeregulatory protein1e-0654.3
NC_007952:1453000:1477605147760514788701266Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein2e-0653.9
NC_010337:98974:1023691023691035711203Heliobacterium modesticaldum Ice1, complete genomebranched chain amino acid abc transporter, amino acid-binding protein7e-0652.4