Pre_GI: BLASTP Hits

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Query: NC_007952:495000:500102 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 500102, End: 502156, Length: 2055

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010551:1462827:1470800147080014728302031Burkholderia ambifaria MC40-6 chromosome 1, complete sequencephospholipase D/Transphosphatidylase0683
NC_007511:3371319:3381403338140333834482046Burkholderia sp. 383 chromosome 2, complete sequencePhospholipase D/Transphosphatidylase0652
NC_014323:245979:2550992550992570301932Herbaspirillum seropedicae SmR1 chromosome, complete genomephospholipase8e-113408
NC_010557:1030319:1037889103788910399702082Burkholderia ambifaria MC40-6 chromosome 3, complete sequencephospholipase D/Transphosphatidylase1e-96354
NC_015856:29338:3479234792367982007Collimonas fungivorans Ter331 chromosome, complete genomeputative phospholipase protein5e-95349
NC_008060:1544920:1552877155287715549582082Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephospholipase D/Transphosphatidylase6e-94345
NC_008544:615448:6290406290406311212082Burkholderia cenocepacia HI2424 chromosome 3, complete sequencephospholipase D/Transphosphatidylase6e-94345
NC_012791:4079062:4086685408668540887602076Variovorax paradoxus S110 chromosome 1, complete genomephospholipase D/Transphosphatidylase1e-81304
NC_010552:1212000:1221862122186212238682007Burkholderia ambifaria MC40-6 chromosome 2, complete sequencephospholipase D/Transphosphatidylase2e-55217
NC_009255:1250939:1287569128756912893291761Burkholderia vietnamiensis G4 chromosome 2, complete sequencephospholipase D/transphosphatidylase8e-54212
NC_016626:400080:4155384155384175472010Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein9e-51202
NC_005773:106000:1341321341321360631932Pseudomonas syringae pv. phaseolicola 1448A, complete genomephospholipase D family protein1e-50201
NC_016590:1183470:1195146119514611971912046Burkholderia sp. YI23 chromosome 3, complete sequencephospholipase D/Transphosphatidylase4e-48193
NC_011001:163813:1724761724761745272052Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative phospholipase D protein5e-48193
NC_007005:5882205:5892924589292458949782055Pseudomonas syringae pv. syringae B728a, complete genomePhospholipase D/Transphosphatidylase1e-45185
NC_005085:1269787:1298329129832913002991971Chromobacterium violaceum ATCC 12472, complete genomeprobable phospholipase protein3e-38160
NC_012913:280506:2853942853942875682175Aggregatibacter aphrophilus NJ8700, complete genomephospholipase D/Transphosphatidylase5e-34146
NC_014323:245979:252738252738253406669Herbaspirillum seropedicae SmR1 chromosome, complete genomephosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase1e-28128
NC_016626:400080:418850418850419719870Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein9e-1479.3
NC_016590:1183470:119249911924991193329831Burkholderia sp. YI23 chromosome 3, complete sequencephospholipase D/Transphosphatidylase2e-1172
NC_011001:163813:176050176050176448399Burkholderia cenocepacia J2315 chromosome 2, complete sequence1e-0965.5
NC_012969:1442147:1442147144214714443452199Methylovorus glucosetrophus SIP3-4 chromosome, complete genomephospholipase D5e-0757