Pre_GI: BLASTP Hits

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Query: NC_007952:1934249:1950507 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1950507, End: 1950956, Length: 450

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011083:338910:341201341201341659459Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein5e-26116
NC_006905:326517:326517326517327023507Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein6e-26116
NC_002947:4604582:461314246131424613573432Pseudomonas putida KT2440, complete genomehypothetical protein2e-1581.3
NC_016514:2713834:275261027526102753155546Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein9e-1372.4
NC_013956:2592378:260898126089812609421441Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-0858.2
NC_014121:1589389:159116215911621591539378Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-0858.2
NC_016816:1852659:186425518642551864695441Pantoea ananatis LMG 5342, complete genomehypothetical protein5e-0856.6
NC_015138:2110149:211276621127662113197432Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein1e-0652