Pre_GI: BLASTP Hits

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Query: NC_007952:1934249:1936975 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1936975, End: 1937835, Length: 861

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008313:2142397:215542321554232156283861Ralstonia eutropha H16 chromosome 1, complete sequencehydroxyacylglutathione hydrolase3e-114411
NC_005085:24623:476324763248492861Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-103375
NC_008782:2568027:259110425911042592006903Acidovorax sp. JS42, complete genomebeta-lactamase domain protein1e-101369
NC_015740:2614317:264526126452612646124864Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completemetallo-beta-lactamase family protein2e-100365
NC_017100:2538461:255629725562972557223927Acetobacter pasteurianus IFO 3283-03, complete genomemetallo-beta-lactamase2e-93342
NC_017108:2535798:255363425536342554560927Acetobacter pasteurianus IFO 3283-12, complete genomemetallo-beta-lactamase2e-93342
NC_017111:2535000:255365225536522554578927Acetobacter pasteurianus IFO 3283-32, complete genomemetallo-beta-lactamase2e-93342
NC_017121:2535803:255363925536392554565927Acetobacter pasteurianus IFO 3283-07, complete genomemetallo-beta-lactamase2e-93342
NC_017125:2538441:255627725562772557203927Acetobacter pasteurianus IFO 3283-22, complete genomemetallo-beta-lactamase2e-93342
NC_017146:2538483:255631925563192557245927Acetobacter pasteurianus IFO 3283-26, complete genomemetallo-beta-lactamase2e-93342
NC_017986:331610:358483358483359361879Pseudomonas putida ND6 chromosome, complete genomemetallo-beta-lactamase superfamily protein1e-92339
NC_003911:1078949:107984910798491080766918Silicibacter pomeroyi DSS-3, complete genomemetallo-beta-lactamase family protein8e-91333
NC_007508:2756945:277845127784512779317867Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative metallo-beta-lactamase superfamily protein7e-91333
NC_009952:2661268:268079226807922681676885Dinoroseobacter shibae DFL 12, complete genomehypothetical protein6e-83307
NC_012988:670101:683085683085683996912Methylobacterium extorquens DM4, complete genomehydroxyacylglutathione hydrolase1e-81303
NC_012808:1220378:126817512681751269086912Methylobacterium extorquens AM1, complete genomebeta-lactamase domain protein, putative hydroxyacylglutathione hydrolase1e-81302
NC_011894:2811573:282802128280212828944924Methylobacterium nodulans ORS 2060, complete genomebeta-lactamase domain protein2e-80298
NC_009720:3210387:321558032155803216485906Xanthobacter autotrophicus Py2, complete genomebeta-lactamase domain-containing protein6e-80297
NC_014100:533322:553575553575554417843Caulobacter segnis ATCC 21756 chromosome, complete genomeglyoxalase II family Zn-dependent hydrolase1e-48193
NC_017986:331610:366092366092366511420Pseudomonas putida ND6 chromosome, complete genomeBeta-lactamase-like protein9e-45180
NC_009465:766893:792965792965793663699Candidatus Vesicomyosocius okutanii HA, complete genomeglyoxalase II3e-24112
NC_013194:1955582:1959729195972919607931065Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completebeta-lactamase domain protein2e-21103
NC_011761:2344408:235118923511892351941753Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completemetallo-beta-lactamase family protein5e-21101
NC_011206:2239109:224589022458902246642753Acidithiobacillus ferrooxidans ATCC 53993, complete genomebeta-lactamase domain protein5e-21101
NC_014315:1744485:176404817640481764800753Nitrosococcus watsoni C-113 chromosome, complete genomeHydroxyacylglutathione hydrolase3e-1892.4
NC_007484:1694738:169857916985791699331753Nitrosococcus oceani ATCC 19707, complete genomeBeta-lactamase-like6e-1891.7
NC_008095:5312926:531758553175855318286702Myxococcus xanthus DK 1622, complete genomemetallo-beta-lactamase family protein3e-1685.9
NC_009720:3210387:321905832190583219810753Xanthobacter autotrophicus Py2, complete genomebeta-lactamase domain-containing protein1e-1584
NC_012968:865465:870706870706871401696Methylotenera mobilis JLW8, complete genomeHydroxyacylglutathione hydrolase2e-1583.2
NC_014328:3682000:368240036824003682999600Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Zn-dependent hydrolase1e-1480.1
NC_019964:2680935:2684088268408826852301143Halovivax ruber XH-70, complete genomeZn-dependent hydrolase, glyoxylase1e-1273.9
NC_015954:2764919:2766775276677527679231149Halophilic archaeon DL31 chromosome, complete genomeRhodanese-like protein3e-1272.4
NC_009077:1027357:102735710273571028073717Mycobacterium sp. JLS, complete genomebeta-lactamase domain protein2e-1170.1
NC_007644:1694879:171534917153491715972624Moorella thermoacetica ATCC 39073, complete genomeBeta-lactamase-like3e-1169.3
NC_013939:1417750:143629914362991436925627Deferribacter desulfuricans SSM1, complete genomemetallo-beta-lactamase family protein3e-1169.3
NC_007643:1781723:179296517929651793609645Rhodospirillum rubrum ATCC 11170, complete genomeBeta-lactamase-like3e-1168.9
NC_014219:2509062:252091525209152521577663Bacillus selenitireducens MLS10 chromosome, complete genomebeta-lactamase domain protein5e-1168.6
NC_016627:3205333:323872632387263239355630Clostridium clariflavum DSM 19732 chromosome, complete genomeZn-dependent hydrolase1e-1067.4
NC_007759:2748000:2764995276499527664521458Syntrophus aciditrophicus SB, complete genomehydroxyacylglutathione hydrolase1e-1067.4
NC_007519:791679:806743806743807369627Desulfovibrio alaskensis G20 chromosome, complete genomemetallo-beta-lactamase family protein2e-1066.6
NC_014831:285759:2945282945282957391212Thermaerobacter marianensis DSM 12885 chromosome, complete genomeRhodanese domain protein1e-0963.9
NC_016645:2387023:238702323870232387646624Pyrobaculum sp. 1860 chromosome, complete genomebeta-lactamase1e-0963.9
NC_015684:362236:388130388130388801672Oligotropha carboxidovorans OM5 chromosome, complete genomehydrolase2e-0963.2
NC_011386:136223:139872139872140579708Oligotropha carboxidovorans OM5, complete genomebeta-lactamase domain protein2e-0963.2
NC_004129:5846415:585217558521755852819645Pseudomonas fluorescens Pf-5, complete genomemetallo-beta-lactamase family protein2e-0963.2
NC_018876:307464:3248153248153261851371Methanolobus psychrophilus R15 chromosome, complete genomemetallo-beta-lactamase4e-0962.4
NC_014774:171500:174705174705175355651Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completehypothetical protein5e-0962
NC_014500:2934232:294852929485292949167639Dickeya dadantii 3937 chromosome, complete genomeputative metal-binding enzyme5e-0962
NC_007651:3560652:359422535942253594869645Burkholderia thailandensis E264 chromosome I, complete sequencemetallo-beta-lactamase family protein7e-0961.6
NC_016776:2516149:251904125190412519652612Bacteroides fragilis 638R, complete genomeputative metallo-beta-lactamase7e-0961.6
NC_017506:1222000:122573412257341226381648Marinobacter adhaerens HP15 chromosome, complete genomemetallo-beta-lactamase family protein6e-0961.6
NC_006347:2375480:237837223783722379010639Bacteroides fragilis YCH46, complete genomeputative metallo-beta-lactamase6e-0961.6
NC_019974:1280500:1298379129837912995481170Natronococcus occultus SP4, complete genomeZn-dependent hydrolase, glyoxylase8e-0961.2
NC_013771:803042:803042803042803818777Cyanobacterium UCYN-A, complete genomehydroxyacylglutathione hydrolase1e-0860.8
NC_016012:805680:823519823519824157639Candidatus Arthromitus sp. SFB-rat-Yit, complete genomebeta-lactamase domain-containing protein1e-0860.8
NC_010682:2642269:264376026437602644533774Ralstonia pickettii 12J chromosome 1, complete sequencehydroxyacylglutathione hydrolase1e-0860.8
NC_016024:275845:281115281115281762648Candidatus Chloracidobacterium thermophilum B chromosome chromosomeZn-dependent hydrolase-like glyoxylase1e-0860.8
NC_013960:2166367:217381221738122174450639Nitrosococcus halophilus Nc4 chromosome, complete genomebeta-lactamase domain protein1e-0860.5
NC_012115:1415827:143328714332871433868582Nautilia profundicola AmH, complete genomemetallo-beta-lactamase family protein2e-0860.1
NC_010125:3393368:339774833977483398512765Gluconacetobacter diazotrophicus PAl 5, complete genomeHydroxyacylglutathione hydrolase2e-0859.7
NC_009725:2072475:2083569208356920849811413Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein2e-0859.7
NC_014960:1735786:179748217974821798117636Anaerolinea thermophila UNI-1, complete genomehypothetical protein3e-0859.3
NC_012781:2802000:281223328122332812862630Eubacterium rectale ATCC 33656, complete genomehydroxyacylglutathione hydrolase6e-0858.5
NC_020410:1684192:169633116963311697023693Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeHydroxyacylglutathione hydrolase5e-0858.5
NC_009092:2644164:264900726490072649651645Shewanella loihica PV-4, complete genomebeta-lactamase domain protein5e-0858.5
NC_006677:1255079:126038812603881261125738Gluconobacter oxydans 621H, complete genomeMetallo-beta-lactamase superfamily protein6e-0858.2
NC_014121:2745097:276700127670012767648648Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebeta-lactamase-like protein6e-0858.2
NC_016027:2446806:245063024506302451289660Gluconacetobacter xylinus NBRC 3288, complete genomemetallo-beta-lactamase8e-0857.8
NC_012780:430653:449769449769450392624Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencehydroxyacylglutathione hydrolase8e-0857.8
NC_010125:955863:959714959714960409696Gluconacetobacter diazotrophicus PAl 5, complete genomeBeta-lactamase-like protein1e-0757
NC_017986:331610:365810365810365944135Pseudomonas putida ND6 chromosome, complete genomeBeta-lactamase-like protein1e-0757
NC_013740:1081454:109524310952431095884642Acidaminococcus fermentans DSM 20731, complete genomeZn-dependent hydrolase, glyoxylase2e-0756.6
NC_006350:3865584:389289638928963893540645Burkholderia pseudomallei K96243 chromosome 1, complete sequencemetallo-beta-lactamase superfamily protein2e-0756.6
NC_014483:3339926:334037433403743341051678Paenibacillus polymyxa E681 chromosome, complete genomeZn-dependent hydrolase3e-0755.8
NC_010546:1175979:119265911926591193432774Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceglyoxalase II4e-0755.5
NC_009483:3644677:367514936751493675850702Geobacter uraniireducens Rf4 chromosome, complete genomebeta-lactamase domain-containing protein5e-0755.1
NC_017275:594951:596795596795597538744Sulfolobus islandicus HVE10/4 chromosome, complete genomebeta-lactamase6e-0755.1
NC_006322:2658587:2674360267436026757931434Bacillus licheniformis ATCC 14580, complete genomehypothetical protein6e-0755.1
NC_006270:2657726:2673500267350026749331434Bacillus licheniformis ATCC 14580, complete genomeMetallo-beta-lactamase/rhodanese-like domain protein6e-0755.1
NC_013172:3141739:3158232315823231597401509Brachybacterium faecium DSM 4810, complete genomeZn-dependent hydrolase, glyoxylase5e-0755.1
NC_012588:620353:622197622197622940744Sulfolobus islandicus M.14.25 chromosome, complete genomebeta-lactamase5e-0755.1
NC_012632:638347:640191640191640934744Sulfolobus islandicus M.16.27 chromosome, complete genomebeta-lactamase domain-containing protein5e-0755.1
NC_012726:641763:643930643930644673744Sulfolobus islandicus M.16.4 chromosome, complete genomebeta-lactamase domain-containing protein5e-0755.1
NC_020409:192508:1925081925081938931386Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeBeta-lactamase domain protein7e-0754.7
NC_015681:401084:408519408519409412894Thermodesulfatator indicus DSM 15286 chromosome, complete genomebeta-lactamase domain-containing protein7e-0754.7
NC_002516:891000:906847906847907488642Pseudomonas aeruginosa PAO1, complete genomehypothetical protein1e-0654.3
NC_013526:911909:9123319123319137611431Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomebeta-lactamase domain protein9e-0754.3
NC_014915:2092678:2096194209619420973211128Geobacillus sp. Y412MC52 chromosome, complete genomeRhodanese domain protein9e-0754.3
NC_013411:2951559:2956262295626229573891128Geobacillus sp. Y412MC61, complete genomebeta-lactamase domain protein9e-0754.3
NC_014206:1497942:1518002151800215191291128Geobacillus sp. C56-T3 chromosome, complete genomerhodanese9e-0754.3
NC_008463:4743296:474411547441154744756642Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-0653.9
NC_009901:2915939:293462629346262935417792Shewanella pealeana ATCC 700345, complete genomeHydroxyacylglutathione hydrolase1e-0653.9
NC_013720:545829:5669605669605683571398Pirellula staleyi DSM 6068, complete genomebeta-lactamase domain protein1e-0653.9
NC_011770:4924127:493089849308984931542645Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-0653.9
NC_014910:1765065:178875017887501789520771Alicycliphilus denitrificans BC chromosome, complete genomehydroxyacylglutathione hydrolase2e-0653.1
NC_018664:1795223:180687018068701807484615Clostridium acidurici 9a chromosome, complete genomebeta-lactamase domain-containing protein3e-0652.8
NC_006510:2110430:2114457211445721155841128Geobacillus kaustophilus HTA426, complete genomehypothetical protein4e-0652.4
NC_013169:1545890:156486915648691565567699Kytococcus sedentarius DSM 20547, complete genomeZn-dependent hydrolase, glyoxylase6e-0651.6
NC_007508:1221500:122333612233361224103768Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehydroxyacylglutathione hydrolase9e-0651.2