Pre_GI: BLASTP Hits

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Query: NC_007951:4741620:4745608 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4745608, End: 4746684, Length: 1077

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017082:3717939:374407837440783745076999Bradyrhizobium sp. S23321, complete genomeNapD-like protein6e-91334
NC_009663:2478311:247831124783112479285975Sulfurovum sp. NBC37-1, complete genomenon-specific acid phosphatase2e-87322
NC_011666:2435438:2436744243674424377631020Methylocella silvestris BL2, complete genomenonspecific acid phosphatase precursor1e-78293
NC_010676:2975572:2997069299706929981661098Burkholderia phytofirmans PsJN chromosome 2, complete sequenceputative nonspecific acid phosphatase, NapD-like protein2e-70266
NC_003552:3269000:328106532810653281886822Methanosarcina acetivorans C2A, complete genomenonspecific acid phosphatase precursor1e-56220
NC_020133:5020500:504184550418455042741897Mycobacterium liflandii 128FXT, complete genomeacid phosphatase precursor7e-53207
NC_012669:832555:845453845453846376924Beutenbergia cavernae DSM 12333, complete genomehydrolase4e-44179
NC_012988:769981:827659827659828117459Methylobacterium extorquens DM4, complete genome1e-37157
NC_013410:2253631:2281315228131522824451131Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein8e-28124
NC_012988:769981:827362827362827619258Methylobacterium extorquens DM4, complete genome2e-1584
NC_012988:769981:828118828118828336219Methylobacterium extorquens DM4, complete genome3e-1170.1