Pre_GI: BLASTP Hits

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Query: NC_007951:4608560:4622858 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4622858, End: 4623226, Length: 369

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015137:2582467:260531226053122605674363Burkholderia sp. CCGE1001 chromosome 2, complete sequencehypothetical protein3e-33140
NC_003295:2669480:269298526929852693275291Ralstonia solanacearum GMI1000, complete genomehypothetical protein6e-1269.7
NC_012856:3615550:363834136383413638580240Ralstonia pickettii 12D chromosome 1, complete genomehypothetical protein9e-1062.4
NC_010625:1551430:157264215726421573043402Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein7e-0856.2
NC_015222:1905194:191600919160091916326318Nitrosomonas sp. AL212 chromosome, complete genomehypothetical protein8e-0855.8
NC_009656:5297000:529805852980585298294237Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein8e-0752.4
NC_017033:2081206:210655121065512107522972Frateuria aurantia DSM 6220 chromosome, complete genomeKilA-N domain-containing protein1e-0652