Pre_GI: BLASTP Hits

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Query: NC_007951:3655088:3669452 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3669452, End: 3669982, Length: 531

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014641:20103:439634396344493531Achromobacter xylosoxidans A8 plasmid pA81, complete sequencering hydroxylating beta subunit family protein 61e-100364
NC_016147:3023180:304000930400093040473465Pseudoxanthomonas spadix BD-a59 chromosome, complete genomesmall subunit aromatic oxygenase3e-42170
NC_016585:1004000:101710510171051017578474Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceputative aromatic-ring-hydroxylating dioxygenase, beta subunit2e-35148
NC_016147:2964178:298013329801332980591459Pseudoxanthomonas spadix BD-a59 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta2e-34145
NC_007951:3655088:367633636763363676815480Burkholderia xenovorans LB400 chromosome 1, complete sequenceAromatic-ring-hydroxylating dioxygenase, beta subunit1e-28125
NC_010170:1580832:158973415897341590213480Bordetella petrii, complete genomehypothetical protein1e-28125
NC_011666:1572487:158948515894851589961477Methylocella silvestris BL2, complete genomearomatic-ring-hydroxylating dioxygenase beta subunit1e-25115
NC_010170:3944228:395314139531413953626486Bordetella petrii, complete genomeprobable ring hydroxylating beta subunit1e-22106
NC_008712:250240:265642265642266136495Arthrobacter aurescens TC1 plasmid TC1, complete sequenceAromatic-ring hydroxylating dioxygenase beta-subunit3e-22104
NC_015727:1294532:132246413224641322982519Cupriavidus necator N-1 plasmid BB1p, complete sequencedioxygenase small subunit6e-21100
NC_013446:1648556:169079216907921691256465Comamonas testosteroni CNB-2, complete genomeoxygenase small subunit of terephthalate 1,2-dioxygenase1e-1995.5
NC_015138:201323:215178215178215705528Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completearomatic-ring-hydroxylating dioxygenase subunit beta6e-1993.6
NC_008752:166877:185768185768186256489Acidovorax avenae subsp. citrulli AAC00-1, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-1891.3
NC_008781:2611702:262452426245242625009486Polaromonas naphthalenivorans CJ2, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit8e-1889.7
NC_009077:2308634:232742823274282327925498Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-0961.6
NC_008146:1748026:178513917851391785636498Mycobacterium sp. MCS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-0859.3
NC_009338:555587:591079591079591576498Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-0858.2
NC_014641:20103:369813698137232252Achromobacter xylosoxidans A8 plasmid pA81, complete sequencering hydroxylating beta subunit family protein 55e-0857.4