Pre_GI: BLASTP Hits

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Query: NC_007951:3631772:3642990 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3642990, End: 3643409, Length: 420

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014217:2172464:218302221830222183432411Starkeya novella DSM 506 chromosome, complete genomeDoxX family protein2e-1167.8
NC_009937:4122652:413837841383784138812435Azorhizobium caulinodans ORS 571, complete genomeconserved hypothetical protein3e-1063.5
NC_009720:5079048:509826350982635098742480Xanthobacter autotrophicus Py2, complete genomeDoxX family protein3e-0857.4
NC_007951:3631772:364144436414443642196753Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein4e-0650.1